Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31023.Seq
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113254-1|AAM29259.1| 322|Drosophila melanogaster AT14373p pro... 107 1e-23
AE014297-3840|AAN14062.1| 322|Drosophila melanogaster CG4774-PC... 107 1e-23
AE014297-3839|AAF56497.2| 322|Drosophila melanogaster CG4774-PB... 107 1e-23
AE014297-3838|AAF56496.2| 322|Drosophila melanogaster CG4774-PA... 107 1e-23
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P... 29 3.6
BT009989-1|AAQ22458.1| 582|Drosophila melanogaster RE48393p pro... 29 6.3
AE014298-528|AAN09095.1| 582|Drosophila melanogaster CG12206-PC... 29 6.3
AE014298-527|AAN09094.1| 582|Drosophila melanogaster CG12206-PB... 29 6.3
AE014298-526|AAF45872.2| 582|Drosophila melanogaster CG12206-PA... 29 6.3
BT011342-1|AAR96134.1| 265|Drosophila melanogaster RH59487p pro... 28 8.4
AY118532-1|AAM49901.1| 265|Drosophila melanogaster LD25561p pro... 28 8.4
AE014296-572|AAF47723.1| 265|Drosophila melanogaster CG12079-PA... 28 8.4
>AY113254-1|AAM29259.1| 322|Drosophila melanogaster AT14373p
protein.
Length = 322
Score = 107 bits (257), Expect = 1e-23
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = -3
Query: 509 TLFISLTWQDLIPISLTLLIVGRDIALVVAGFVIRYISXPPPRTLSRYFDVTHATAQLAP 330
+L ISL + DL+P+ L ++V RD+ L+ AGFVIRYIS PPP+T SRYFD TH TAQL P
Sbjct: 198 SLVISLCYTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEP 257
Query: 329 TFISKVNTAVQLLLVGTTLASPVFGML 249
T +SK+NT VQL +G +L +P++ L
Sbjct: 258 TLLSKINTGVQLATIGLSLGAPIWNYL 284
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = -2
Query: 273 GVPSFWYVDHPALKVLCGITAASTIVSAVSYLVSK 169
G P + Y+DHPAL+ L +T +T +A+SY++++
Sbjct: 277 GAPIWNYLDHPALQGLWYLTGLTTAATALSYVMNR 311
>AE014297-3840|AAN14062.1| 322|Drosophila melanogaster CG4774-PC,
isoform C protein.
Length = 322
Score = 107 bits (257), Expect = 1e-23
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = -3
Query: 509 TLFISLTWQDLIPISLTLLIVGRDIALVVAGFVIRYISXPPPRTLSRYFDVTHATAQLAP 330
+L ISL + DL+P+ L ++V RD+ L+ AGFVIRYIS PPP+T SRYFD TH TAQL P
Sbjct: 198 SLVISLCYTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEP 257
Query: 329 TFISKVNTAVQLLLVGTTLASPVFGML 249
T +SK+NT VQL +G +L +P++ L
Sbjct: 258 TLLSKINTGVQLATIGLSLGAPIWNYL 284
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = -2
Query: 273 GVPSFWYVDHPALKVLCGITAASTIVSAVSYLVSK 169
G P + Y+DHPAL+ L +T +T +A+SY++++
Sbjct: 277 GAPIWNYLDHPALQGLWYLTGLTTAATALSYVMNR 311
>AE014297-3839|AAF56497.2| 322|Drosophila melanogaster CG4774-PB,
isoform B protein.
Length = 322
Score = 107 bits (257), Expect = 1e-23
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = -3
Query: 509 TLFISLTWQDLIPISLTLLIVGRDIALVVAGFVIRYISXPPPRTLSRYFDVTHATAQLAP 330
+L ISL + DL+P+ L ++V RD+ L+ AGFVIRYIS PPP+T SRYFD TH TAQL P
Sbjct: 198 SLVISLCYTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEP 257
Query: 329 TFISKVNTAVQLLLVGTTLASPVFGML 249
T +SK+NT VQL +G +L +P++ L
Sbjct: 258 TLLSKINTGVQLATIGLSLGAPIWNYL 284
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = -2
Query: 273 GVPSFWYVDHPALKVLCGITAASTIVSAVSYLVSK 169
G P + Y+DHPAL+ L +T +T +A+SY++++
Sbjct: 277 GAPIWNYLDHPALQGLWYLTGLTTAATALSYVMNR 311
>AE014297-3838|AAF56496.2| 322|Drosophila melanogaster CG4774-PA,
isoform A protein.
Length = 322
Score = 107 bits (257), Expect = 1e-23
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = -3
Query: 509 TLFISLTWQDLIPISLTLLIVGRDIALVVAGFVIRYISXPPPRTLSRYFDVTHATAQLAP 330
+L ISL + DL+P+ L ++V RD+ L+ AGFVIRYIS PPP+T SRYFD TH TAQL P
Sbjct: 198 SLVISLCYTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEP 257
Query: 329 TFISKVNTAVQLLLVGTTLASPVFGML 249
T +SK+NT VQL +G +L +P++ L
Sbjct: 258 TLLSKINTGVQLATIGLSLGAPIWNYL 284
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = -2
Query: 273 GVPSFWYVDHPALKVLCGITAASTIVSAVSYLVSK 169
G P + Y+DHPAL+ L +T +T +A+SY++++
Sbjct: 277 GAPIWNYLDHPALQGLWYLTGLTTAATALSYVMNR 311
>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
protein.
Length = 2938
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 243 DDQHTKNWGRQRSAYQ 290
DD HTK+WGR+R Y+
Sbjct: 2081 DDLHTKSWGRRRIRYE 2096
>BT009989-1|AAQ22458.1| 582|Drosophila melanogaster RE48393p
protein.
Length = 582
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 392 PPPRTLSRYFDVTHATAQLAPTFISKVNTAVQL 294
PPP T + + AT Q+APT S NT + L
Sbjct: 31 PPPATTTATAEAEAATKQVAPTAKSNSNTEMSL 63
>AE014298-528|AAN09095.1| 582|Drosophila melanogaster CG12206-PC,
isoform C protein.
Length = 582
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 392 PPPRTLSRYFDVTHATAQLAPTFISKVNTAVQL 294
PPP T + + AT Q+APT S NT + L
Sbjct: 31 PPPATTTATAEAEAATKQVAPTAKSNSNTEMSL 63
>AE014298-527|AAN09094.1| 582|Drosophila melanogaster CG12206-PB,
isoform B protein.
Length = 582
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 392 PPPRTLSRYFDVTHATAQLAPTFISKVNTAVQL 294
PPP T + + AT Q+APT S NT + L
Sbjct: 31 PPPATTTATAEAEAATKQVAPTAKSNSNTEMSL 63
>AE014298-526|AAF45872.2| 582|Drosophila melanogaster CG12206-PA,
isoform A protein.
Length = 582
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 392 PPPRTLSRYFDVTHATAQLAPTFISKVNTAVQL 294
PPP T + + AT Q+APT S NT + L
Sbjct: 31 PPPATTTATAEAEAATKQVAPTAKSNSNTEMSL 63
>BT011342-1|AAR96134.1| 265|Drosophila melanogaster RH59487p
protein.
Length = 265
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 316 LLIKVGASCAVACVTSKYLLNVRGGGKLIYRMTNPATTNAISRPTI 453
L+ +GA AVA +++K+++ G L T P +PT+
Sbjct: 4 LIRNLGARAAVAALSAKHVVPAAGSTALRMASTTPVEPKKADKPTV 49
>AY118532-1|AAM49901.1| 265|Drosophila melanogaster LD25561p
protein.
Length = 265
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 316 LLIKVGASCAVACVTSKYLLNVRGGGKLIYRMTNPATTNAISRPTI 453
L+ +GA AVA +++K+++ G L T P +PT+
Sbjct: 4 LIRNLGARAAVAALSAKHVVPAAGSTALRMASTTPVEPKKADKPTV 49
>AE014296-572|AAF47723.1| 265|Drosophila melanogaster CG12079-PA
protein.
Length = 265
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 316 LLIKVGASCAVACVTSKYLLNVRGGGKLIYRMTNPATTNAISRPTI 453
L+ +GA AVA +++K+++ G L T P +PT+
Sbjct: 4 LIRNLGARAAVAALSAKHVVPAAGSTALRMASTTPVEPKKADKPTV 49
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,750,979
Number of Sequences: 53049
Number of extensions: 473890
Number of successful extensions: 926
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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