Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31019.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   4.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.1  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 101 GPPKGIPALKAHIIANKIDVALWGVRV 181
           GP +    L AH++A    V L G+RV
Sbjct: 333 GPARSRRHLPAHLVAGTCFVQLIGMRV 359


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 151 NRRSSLGGPRNHRAVYHWIRV 213
           N R    GPR   AVY  +R+
Sbjct: 179 NIRLKRAGPRTESAVYEPVRI 199


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +2

Query: 323 SRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVPIFLFALLHAASY 463
           SR F    F  D + +   SL F   + ++   VP+ L+ +   A+Y
Sbjct: 297 SRIFGLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTATY 343


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +2

Query: 323 SRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVPIFLFALLHAASY 463
           SR F    F  D + +   SL F   + ++   VP+ L+ +   A+Y
Sbjct: 22  SRIFGLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTATY 68


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 204  PMVHSTVITRTPQRATS 154
            P VHS+ +   PQ +T+
Sbjct: 1797 PSVHSSTVVPPPQHSTT 1813


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 186 PCCVPLDTCSHCLT 227
           P C  +D+CS+ LT
Sbjct: 384 PGCAMVDSCSNILT 397


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 359 SAHYLFYSLXFMNVVPNLLILVPIFLFALLH 451
           + + LFY     +V  NL   VP+ + AL H
Sbjct: 170 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 200


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 359 SAHYLFYSLXFMNVVPNLLILVPIFLFALLH 451
           + + LFY     +V  NL   VP+ + AL H
Sbjct: 126 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,056
Number of Sequences: 336
Number of extensions: 2406
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)