Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31019.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   0.62 
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         25   1.9  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         25   1.9  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         25   1.9  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   2.5  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    24   3.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   3.3  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    24   3.3  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   5.8  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 10   HSILYNFSCPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHH 141
            HS+ Y     +++F  +  Y ++        STKR P  E S++
Sbjct: 2079 HSLRYPMDSAASSFTLIYDYNKNGEVKSIKESTKRVPMFEFSYN 2122


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 237 RHSTKRTRER*RLQRCGY 290
           RH  +R RER R QR GY
Sbjct: 32  RHHHRRRRERYRSQRFGY 49


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 237 RHSTKRTRER*RLQRCGY 290
           RH  +R RER R QR GY
Sbjct: 32  RHHHRRRRERYRSQRFGY 49


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 237 RHSTKRTRER*RLQRCGY 290
           RH  +R RER R QR GY
Sbjct: 32  RHHHRRRRERYRSQRFGY 49


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 464 NTKRRVAAQIKRLAPILTNWARRS*KXVNRINSERCPPGR 345
           N  +   A I+++ P   N  RRS +   R  S R PP R
Sbjct: 238 NIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPAR 277


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 172 GPRNHRAVYHWIRVPIV*QSSVGILQSVLANADD 273
           GP   R VY W  + +V      IL ++  NADD
Sbjct: 35  GPILIRKVYSWWTLAMVLIQFFAILGNLATNADD 68


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +1

Query: 268 DDFSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTXFHERRAQFVNIGA 426
           D  +AAA +  ++     + GF G  LP G  S  +     H R A  +  GA
Sbjct: 623 DSGAAAAAAAAAAAAAASILGFSGVPLPLGGSSSLVESLVEHHRLAASLGGGA 675


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 172 GPRNHRAVYHWIRVPIV*QSSVGILQSVLANADD 273
           GP   R VY W  + +V      IL ++  NADD
Sbjct: 35  GPILIRKVYSWWTLAMVLIQFFAILGNLATNADD 68


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 103 STKRHPSLESSHHCQ*NRRSSLGGPRNHRAVYHWI 207
           S  R P +    H Q  RRSS    R  R+V +++
Sbjct: 60  SKNRMPPVPPPKHSQRRRRSSSPRTRQFRSVCYYV 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,763
Number of Sequences: 2352
Number of extensions: 10683
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)