Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31019.Seq
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457260-1|CAG33541.1|  247|Homo sapiens FLJ10525 protein.            112   7e-25
BC000948-1|AAH00948.2|  247|Homo sapiens transmembrane protein 3...   112   7e-25
AY659966-1|AAV70491.1|  247|Homo sapiens SHINC3 protein.              112   7e-25
AK023062-1|BAB14384.1|  247|Homo sapiens protein ( Homo sapiens ...   112   7e-25
AK001387-1|BAA91665.1|  247|Homo sapiens protein ( Homo sapiens ...   112   7e-25
BC075825-1|AAH75825.1|  661|Homo sapiens ALS2CL protein protein.       31   1.7  
BC061883-1|AAH61883.1|  661|Homo sapiens ALS2CL protein protein.       31   1.7  
BC042906-1|AAH42906.1|  661|Homo sapiens ALS2CL protein protein.       31   1.7  
AK131273-1|BAD18450.1|  705|Homo sapiens protein ( Homo sapiens ...    31   1.7  
AK131270-1|BAD18448.1|  953|Homo sapiens protein ( Homo sapiens ...    31   1.7  
AK093844-1|BAC04237.1|  468|Homo sapiens protein ( Homo sapiens ...    31   1.7  
AK092455-1|BAC03895.1|  300|Homo sapiens protein ( Homo sapiens ...    31   1.7  
AB107015-1|BAD51817.1|  953|Homo sapiens ALS2 C-terminal like pr...    31   1.7  
L29220-1|AAA61483.1|  152|Homo sapiens clk3 protein.                   30   5.1  
BC001210-1|AAH01210.1|  487|Homo sapiens phosphatidylserine synt...    30   5.1  

>CR457260-1|CAG33541.1|  247|Homo sapiens FLJ10525 protein.
          Length = 247

 Score =  112 bits (269), Expect = 7e-25
 Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
 Frame = +2

Query: 95  DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFY-KAYSR 262
           DT P  P+G  A++  ++ NK+D A+W  R+ TV C+  +V PL   +  ++FY +A   
Sbjct: 3   DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61

Query: 263 TLTTSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVPIFLFA 442
              TSALRLHQR+P     LSR F+A+  LEDS HYL YSL F+N  P  + + P+ LF+
Sbjct: 62  NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119

Query: 443 LLHAASYSXTILDXLGQXS 499
           LLHAA+Y+  +LD  G  S
Sbjct: 120 LLHAATYTKKVLDARGSNS 138


>BC000948-1|AAH00948.2|  247|Homo sapiens transmembrane protein 33
           protein.
          Length = 247

 Score =  112 bits (269), Expect = 7e-25
 Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
 Frame = +2

Query: 95  DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFY-KAYSR 262
           DT P  P+G  A++  ++ NK+D A+W  R+ TV C+  +V PL   +  ++FY +A   
Sbjct: 3   DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61

Query: 263 TLTTSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVPIFLFA 442
              TSALRLHQR+P     LSR F+A+  LEDS HYL YSL F+N  P  + + P+ LF+
Sbjct: 62  NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119

Query: 443 LLHAASYSXTILDXLGQXS 499
           LLHAA+Y+  +LD  G  S
Sbjct: 120 LLHAATYTKKVLDARGSNS 138


>AY659966-1|AAV70491.1|  247|Homo sapiens SHINC3 protein.
          Length = 247

 Score =  112 bits (269), Expect = 7e-25
 Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
 Frame = +2

Query: 95  DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFY-KAYSR 262
           DT P  P+G  A++  ++ NK+D A+W  R+ TV C+  +V PL   +  ++FY +A   
Sbjct: 3   DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61

Query: 263 TLTTSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVPIFLFA 442
              TSALRLHQR+P     LSR F+A+  LEDS HYL YSL F+N  P  + + P+ LF+
Sbjct: 62  NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119

Query: 443 LLHAASYSXTILDXLGQXS 499
           LLHAA+Y+  +LD  G  S
Sbjct: 120 LLHAATYTKKVLDARGSNS 138


>AK023062-1|BAB14384.1|  247|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13000 fis, clone NT2RP3000333, highly similar to
           Rattus norvegicus db83 mRNA. ).
          Length = 247

 Score =  112 bits (269), Expect = 7e-25
 Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
 Frame = +2

Query: 95  DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFY-KAYSR 262
           DT P  P+G  A++  ++ NK+D A+W  R+ TV C+  +V PL   +  ++FY +A   
Sbjct: 3   DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61

Query: 263 TLTTSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVPIFLFA 442
              TSALRLHQR+P     LSR F+A+  LEDS HYL YSL F+N  P  + + P+ LF+
Sbjct: 62  NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119

Query: 443 LLHAASYSXTILDXLGQXS 499
           LLHAA+Y+  +LD  G  S
Sbjct: 120 LLHAATYTKKVLDARGSNS 138


>AK001387-1|BAA91665.1|  247|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10525 fis, clone NT2RP2000892. ).
          Length = 247

 Score =  112 bits (269), Expect = 7e-25
 Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
 Frame = +2

Query: 95  DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFN-NPVSAFY-KAYSR 262
           DT P  P+G  A++  ++ NK+D A+W  R+ TV C+  +V PL   +  ++FY +A   
Sbjct: 3   DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61

Query: 263 TLTTSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVPIFLFA 442
              TSALRLHQR+P     LSR F+A+  LEDS HYL YSL F+N  P  + + P+ LF+
Sbjct: 62  NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119

Query: 443 LLHAASYSXTILDXLGQXS 499
           LLHAA+Y+  +LD  G  S
Sbjct: 120 LLHAATYTKKVLDARGSNS 138


>BC075825-1|AAH75825.1|  661|Homo sapiens ALS2CL protein protein.
          Length = 661

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 280 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTXFHERRAQFVNIG-ANLFICAATR 453
           A    +++ TRDL + G    + LP     LF L+   HER   F + G ANL +   T+
Sbjct: 450 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 509

Query: 454 RFVFXDYP*XSW 489
              F D     W
Sbjct: 510 LLEFLDVQKHLW 521


>BC061883-1|AAH61883.1|  661|Homo sapiens ALS2CL protein protein.
          Length = 661

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 280 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTXFHERRAQFVNIG-ANLFICAATR 453
           A    +++ TRDL + G    + LP     LF L+   HER   F + G ANL +   T+
Sbjct: 450 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 509

Query: 454 RFVFXDYP*XSW 489
              F D     W
Sbjct: 510 LLEFLDVQKHLW 521


>BC042906-1|AAH42906.1|  661|Homo sapiens ALS2CL protein protein.
          Length = 661

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 280 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTXFHERRAQFVNIG-ANLFICAATR 453
           A    +++ TRDL + G    + LP     LF L+   HER   F + G ANL +   T+
Sbjct: 450 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 509

Query: 454 RFVFXDYP*XSW 489
              F D     W
Sbjct: 510 LLEFLDVQKHLW 521


>AK131273-1|BAD18450.1|  705|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16212 fis, clone CTONG2024031. ).
          Length = 705

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 280 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTXFHERRAQFVNIG-ANLFICAATR 453
           A    +++ TRDL + G    + LP     LF L+   HER   F + G ANL +   T+
Sbjct: 543 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 602

Query: 454 RFVFXDYP*XSW 489
              F D     W
Sbjct: 603 LLEFLDVQKHLW 614


>AK131270-1|BAD18448.1|  953|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16208 fis, clone CTONG2020374. ).
          Length = 953

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 280 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTXFHERRAQFVNIG-ANLFICAATR 453
           A    +++ TRDL + G    + LP     LF L+   HER   F + G ANL +   T+
Sbjct: 742 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 801

Query: 454 RFVFXDYP*XSW 489
              F D     W
Sbjct: 802 LLEFLDVQKHLW 813


>AK093844-1|BAC04237.1|  468|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36525 fis, clone TRACH2002988. ).
          Length = 468

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 280 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTXFHERRAQFVNIG-ANLFICAATR 453
           A    +++ TRDL + G    + LP     LF L+   HER   F + G ANL +   T+
Sbjct: 257 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 316

Query: 454 RFVFXDYP*XSW 489
              F D     W
Sbjct: 317 LLEFLDVQKHLW 328


>AK092455-1|BAC03895.1|  300|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35136 fis, clone PLACE6009338. ).
          Length = 300

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 280 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTXFHERRAQFVNIG-ANLFICAATR 453
           A    +++ TRDL + G    + LP     LF L+   HER   F + G ANL +   T+
Sbjct: 89  ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 148

Query: 454 RFVFXDYP*XSW 489
              F D     W
Sbjct: 149 LLEFLDVQKHLW 160


>AB107015-1|BAD51817.1|  953|Homo sapiens ALS2 C-terminal like
           protein.
          Length = 953

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 280 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTXFHERRAQFVNIG-ANLFICAATR 453
           A    +++ TRDL + G    + LP     LF L+   HER   F + G ANL +   T+
Sbjct: 742 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 801

Query: 454 RFVFXDYP*XSW 489
              F D     W
Sbjct: 802 LLEFLDVQKHLW 813


>L29220-1|AAA61483.1|  152|Homo sapiens clk3 protein.
          Length = 152

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +1

Query: 67  YGRSKSASRRHWSTKRHP--SLESSHHCQ*NRRSSLGGPRNHRAVYHWIRVPI 219
           YG S+S  RR  S +R P  + + +HHC   R  S     + R    W++ P+
Sbjct: 84  YGPSRSRHRRR-SRERGPYRTRKHAHHCHKRRTRSCSSASSMRLWGTWVKAPL 135


>BC001210-1|AAH01210.1|  487|Homo sapiens phosphatidylserine
           synthase 2 protein.
          Length = 487

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = +2

Query: 98  TGPPKGIPALKAHIIANKIDVALWGVRVITVL----CTIGYVFPLFNNPVSAFYKAYSRT 265
           TGP +G  + ++ +  +  +   W    +TVL    CT+GYV  L   P    Y    R 
Sbjct: 38  TGPGEGRRSTESEVYDDGTNTFFWRAHTLTVLFILTCTLGYVTLLEETPQDTAYNT-KRG 96

Query: 266 LTTSAL 283
           +  S L
Sbjct: 97  IVASIL 102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,709,577
Number of Sequences: 237096
Number of extensions: 1529125
Number of successful extensions: 4115
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4105
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)