Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31019.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118281-1|AAM48310.1|  276|Drosophila melanogaster AT13922p pro...   140   1e-33
AF148686-1|AAD45272.1|  276|Drosophila melanogaster Kruppel homo...   140   1e-33
AE014134-1046|AAF52341.1|  276|Drosophila melanogaster CG9159-PA...   140   1e-33
M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein.         29   4.6  
BT022751-1|AAY55167.1|  572|Drosophila melanogaster IP14661p pro...    29   4.6  
AY089307-1|AAL90045.1|  572|Drosophila melanogaster AT11139p pro...    29   4.6  
AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB...    29   4.6  
AE013599-2157|AAF58079.1|  572|Drosophila melanogaster CG8388-PA...    29   4.6  
U09789-1|AAA18501.1|  737|Drosophila melanogaster cytoplasmic ba...    28   6.1  
BT003476-1|AAO39479.1|  711|Drosophila melanogaster RE59350p pro...    28   6.1  
AE014298-904|AAF46170.1|  738|Drosophila melanogaster CG3929-PA ...    28   6.1  

>AY118281-1|AAM48310.1|  276|Drosophila melanogaster AT13922p
           protein.
          Length = 276

 Score =  140 bits (338), Expect = 1e-33
 Identities = 65/144 (45%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
 Frame = +2

Query: 71  ADQNQQAGDTGPPKGIPA-LKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNNPVSAFY 247
           + Q Q+       + +PA L  H   N+ID ALW +R++ +  T+ YV P+F +  SAF 
Sbjct: 22  SSQQQEQPQQSQSQNVPAKLLQHFQTNRIDSALWALRLLVIFFTVSYVLPIFTSQQSAFS 81

Query: 248 KAYSRTLTTSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVP 427
           K        SALRLHQR+PA   + SR+F+AR F EDS HY+ YSL F N+ P+LL+L+P
Sbjct: 82  KVMLANAAISALRLHQRLPA--FAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIP 139

Query: 428 IFLFALLHAASYSXTILDXLGQXS 499
           + L+++LHA+SYS  +LD +GQ S
Sbjct: 140 VLLYSVLHASSYSLKLLDLIGQNS 163


>AF148686-1|AAD45272.1|  276|Drosophila melanogaster Kruppel homolog
           protein.
          Length = 276

 Score =  140 bits (338), Expect = 1e-33
 Identities = 65/144 (45%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
 Frame = +2

Query: 71  ADQNQQAGDTGPPKGIPA-LKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNNPVSAFY 247
           + Q Q+       + +PA L  H   N+ID ALW +R++ +  T+ YV P+F +  SAF 
Sbjct: 22  SSQQQEQPQQSQSQNVPAKLLQHFQTNRIDSALWALRLLVIFFTVSYVLPIFTSQQSAFS 81

Query: 248 KAYSRTLTTSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVP 427
           K        SALRLHQR+PA   + SR+F+AR F EDS HY+ YSL F N+ P+LL+L+P
Sbjct: 82  KVMLANAAISALRLHQRLPA--FAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIP 139

Query: 428 IFLFALLHAASYSXTILDXLGQXS 499
           + L+++LHA+SYS  +LD +GQ S
Sbjct: 140 VLLYSVLHASSYSLKLLDLIGQNS 163


>AE014134-1046|AAF52341.1|  276|Drosophila melanogaster CG9159-PA
           protein.
          Length = 276

 Score =  140 bits (338), Expect = 1e-33
 Identities = 65/144 (45%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
 Frame = +2

Query: 71  ADQNQQAGDTGPPKGIPA-LKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNNPVSAFY 247
           + Q Q+       + +PA L  H   N+ID ALW +R++ +  T+ YV P+F +  SAF 
Sbjct: 22  SSQQQEQPQQSQSQNVPAKLLQHFQTNRIDSALWALRLLVIFFTVSYVLPIFTSQQSAFS 81

Query: 248 KAYSRTLTTSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLXFMNVVPNLLILVP 427
           K        SALRLHQR+PA   + SR+F+AR F EDS HY+ YSL F N+ P+LL+L+P
Sbjct: 82  KVMLANAAISALRLHQRLPA--FAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIP 139

Query: 428 IFLFALLHAASYSXTILDXLGQXS 499
           + L+++LHA+SYS  +LD +GQ S
Sbjct: 140 VLLYSVLHASSYSLKLLDLIGQNS 163


>M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein.
          Length = 2038

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 244  LQSVLANADDFSAAATSKNSSTRDLPLAGFHGEVLPG 354
            + ++L NA+  +AAA   N++   LP + F G   PG
Sbjct: 1166 MSNMLGNANPLTAAAMLNNNNKTSLPGSNFGGAPAPG 1202


>BT022751-1|AAY55167.1|  572|Drosophila melanogaster IP14661p
           protein.
          Length = 572

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +1

Query: 34  CPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESS 135
           CP T  +  N +   K   R+ W   RH  L  S
Sbjct: 500 CPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRS 533


>AY089307-1|AAL90045.1|  572|Drosophila melanogaster AT11139p
           protein.
          Length = 572

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +1

Query: 34  CPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESS 135
           CP T  +  N +   K   R+ W   RH  L  S
Sbjct: 500 CPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRS 533


>AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB,
            isoform B protein.
          Length = 2038

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 244  LQSVLANADDFSAAATSKNSSTRDLPLAGFHGEVLPG 354
            + ++L NA+  +AAA   N++   LP + F G   PG
Sbjct: 1166 MSNMLGNANPLTAAAMLNNNNKTSLPGSNFGGAPAPG 1202


>AE013599-2157|AAF58079.1|  572|Drosophila melanogaster CG8388-PA
           protein.
          Length = 572

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +1

Query: 34  CPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESS 135
           CP T  +  N +   K   R+ W   RH  L  S
Sbjct: 500 CPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRS 533


>U09789-1|AAA18501.1|  737|Drosophila melanogaster cytoplasmic basic
           protein protein.
          Length = 737

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 25  NFSCPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHCQ 147
           N +  S+ +NTL + G +KS  R   + ++HP L +SH  Q
Sbjct: 222 NSASVSSQYNTLPKLGDTKSLHRVPMTRQQHP-LPTSHQVQ 261


>BT003476-1|AAO39479.1|  711|Drosophila melanogaster RE59350p
           protein.
          Length = 711

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 25  NFSCPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHCQ 147
           N +  S+ +NTL + G +KS  R   + ++HP L +SH  Q
Sbjct: 196 NSASVSSQYNTLPKLGDTKSLHRVPMTRQQHP-LPTSHQVQ 235


>AE014298-904|AAF46170.1|  738|Drosophila melanogaster CG3929-PA
           protein.
          Length = 738

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 25  NFSCPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHCQ 147
           N +  S+ +NTL + G +KS  R   + ++HP L +SH  Q
Sbjct: 223 NSASVSSQYNTLPKLGDTKSLHRVPMTRQQHP-LPTSHQVQ 262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,595,397
Number of Sequences: 53049
Number of extensions: 442662
Number of successful extensions: 1243
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)