Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31018.Seq
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 33 0.11
At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putati... 33 0.19
At1g01490.1 68414.m00065 heavy-metal-associated domain-containin... 32 0.33
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 31 0.44
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 31 0.44
At4g00238.1 68417.m00030 DNA-binding storekeeper protein-related... 31 0.77
At2g25670.2 68415.m03077 expressed protein 31 0.77
At2g25670.1 68415.m03076 expressed protein 31 0.77
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 30 1.3
At5g21430.1 68418.m02535 DNAJ heat shock N-terminal domain-conta... 29 1.8
At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger) fa... 29 1.8
At1g56660.1 68414.m06516 expressed protein 29 1.8
At5g61610.1 68418.m07731 glycine-rich protein / oleosin similar ... 29 2.4
At3g59990.2 68416.m06698 methionyl aminopeptidase, putative / me... 29 2.4
At3g59990.1 68416.m06697 methionyl aminopeptidase, putative / me... 29 2.4
At3g02320.1 68416.m00214 N2,N2-dimethylguanosine tRNA methyltran... 29 2.4
At1g09520.1 68414.m01067 expressed protein 29 2.4
At4g31880.1 68417.m04531 expressed protein 29 3.1
At3g18035.1 68416.m02292 histone H1/H5 family protein contains P... 29 3.1
At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger) fa... 29 3.1
At5g11980.1 68418.m01401 conserved oligomeric Golgi complex comp... 28 4.1
At5g03380.1 68418.m00291 heavy-metal-associated domain-containin... 28 4.1
At4g07380.1 68417.m01133 hypothetical protein 28 4.1
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 28 4.1
At1g76820.1 68414.m08939 expressed protein 28 4.1
At1g17370.1 68414.m02118 oligouridylate-binding protein, putativ... 28 4.1
At5g19950.3 68418.m02375 expressed protein 28 5.4
At5g19950.2 68418.m02374 expressed protein 28 5.4
At5g19950.1 68418.m02373 expressed protein 28 5.4
At5g19420.1 68418.m02314 zinc finger protein, putative / regulat... 28 5.4
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 28 5.4
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 27 7.2
At3g62630.1 68416.m07035 expressed protein 27 7.2
At3g24630.1 68416.m03093 hypothetical protein 27 7.2
At3g04850.1 68416.m00526 tesmin/TSO1-like CXC domain-containing ... 27 7.2
At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein ... 27 7.2
At1g44780.1 68414.m05130 expressed protein ; expression supporte... 27 7.2
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 27 9.5
At4g21326.1 68417.m03081 subtilase family protein contains simil... 27 9.5
At3g18850.2 68416.m02394 phospholipid/glycerol acyltransferase f... 27 9.5
At3g18850.1 68416.m02393 phospholipid/glycerol acyltransferase f... 27 9.5
At3g02100.1 68416.m00176 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.5
At1g68030.1 68414.m07772 PHD finger protein-related contains low... 27 9.5
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 27 9.5
At1g54080.2 68414.m06163 oligouridylate-binding protein, putativ... 27 9.5
At1g54080.1 68414.m06162 oligouridylate-binding protein, putativ... 27 9.5
At1g04430.1 68414.m00434 dehydration-responsive protein-related ... 27 9.5
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKA 268
KKE + E+ +S+E + P KK PA K+ + + D++ EDS E KKA
Sbjct: 153 KKESSSEDDSSSE--DEPAKK-PAAKIAKPAAKDSSSSDDDSDEDSEDEKPATKKA 205
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 119 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 247
++V + KE VKK P KKVE+++ + E+ +E + PA+
Sbjct: 42 KDVIAAVQKEKAVKKVP-KKVESSDDSDSESEEEEKAKKVPAK 83
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 131 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPED-SPAENGVPKKAT 271
S + K + K +PA A+ S+ + +DE ED PA+ KA+
Sbjct: 195 SEDEKPATKKAAPAAAKAASSSDSSDEDSDEESEDEKPAQKKADTKAS 242
>At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putative
(COX6b) nearly identical to subunit 6b of cytochrome c
oxidase [Arabidopsis thaliana] GI:6518353
Length = 191
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 98 DKKEVAPE--EVTSTEPK--ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 247
+K E APE EV S P E +++PA AAE N EN ++E E++P E
Sbjct: 67 EKSESAPESTEVASEAPAAAEDNAEETPA----AAEENNDENASEEVAEETPDE 116
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 95 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKA 268
V+ KEVAPE T E ++ K + VE A S +E ++ APE + + P A
Sbjct: 31 VEVKEVAPEVTTQAEEVKTEQAKEES-PVEEAVSVVEEK-SESAPESTEVASEAPAAA 86
>At1g01490.1 68414.m00065 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 177
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 80 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVP 259
M D + PE+ EPK+ + P K+ EA + GK+ G E+ E G
Sbjct: 62 MTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKKEGEAPKKEEEKKEGGDK 121
Query: 260 KK 265
K+
Sbjct: 122 KE 123
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 134 TEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGV 256
T+PK P + PA++ ++ + + DE+ ED +E G+
Sbjct: 53 TKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGM 93
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 134 TEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGV 256
T+PK P + PA++ ++ + + DE+ ED +E G+
Sbjct: 136 TKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGM 176
>At4g00238.1 68417.m00030 DNA-binding storekeeper protein-related
contains Pfam PF04504: Protein of unknown function,
DUF573; similar to storekeeper protein GI:14268476
[Solanum tuberosum]
Length = 345
Score = 30.7 bits (66), Expect = 0.77
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 146 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKAT 271
ESP KS KK AAES ++G +E +SPA K+A+
Sbjct: 76 ESPAVKS-GKKEGAAESPAVKSGNNEGATESPAVKSGKKRAS 116
>At2g25670.2 68415.m03077 expressed protein
Length = 318
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATMHL 280
K+ A E +++ K+ K+ K+ + ++N + DEA P E P +
Sbjct: 209 KENAAGGESKASKKKKKKDKQKEVKESQEQQANNNADAVDEAAGSEPTEEESPIDVKERI 268
Query: 281 RTVMPQKRKR 310
+ + K+K+
Sbjct: 269 KKLASMKKKK 278
>At2g25670.1 68415.m03076 expressed protein
Length = 318
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATMHL 280
K+ A E +++ K+ K+ K+ + ++N + DEA P E P +
Sbjct: 209 KENAAGGESKASKKKKKKDKQKEVKESQEQQANNNADAVDEAAGSEPTEEESPIDVKERI 268
Query: 281 RTVMPQKRKR 310
+ + K+K+
Sbjct: 269 KKLASMKKKK 278
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 110 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDS 238
V PEE++ ++PK+S A+K+E N KE T E P D+
Sbjct: 302 VNPEEISESKPKQS--VDEVARKIEGFHIN-KEGKTAEKPSDA 341
>At5g21430.1 68418.m02535 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile: PF00226
DnaJ domain;
Length = 218
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 149 SPVKKSPAKKVEAAESNGKENGTDEAPEDSPA 244
SP + S EA G DEAP++SP+
Sbjct: 44 SPARNSSEVSAEAETEGGSSTAVDEAPKESPS 75
>At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 480
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKK 265
+K P+++ S E P K+ K + + ++NG DEA E S + VPK+
Sbjct: 169 RKASLPKKIDSKPEPELPPKEPKIKNLFDLNNEPEDNGLDEA-EGSTFQEVVPKE 222
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 98 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE-NGVPKK 265
+K E PEE KE + +K E E +GK+N E E E PKK
Sbjct: 140 EKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKK 196
>At5g61610.1 68418.m07731 glycine-rich protein / oleosin similar to
variable surface lipoprotein Vsp422-3 (GI:15384285)
[Mycoplasma bovis]; similar to glycine-rich protein
atGRP-6, Arabidopsis thaliana, PIR:T49893
Length = 225
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = +2
Query: 119 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATMHLRTVMP 295
E+ E ++ P K PA+ + + + G ED P + P + H+ MP
Sbjct: 150 EDKLPAEEEKPPQKDKPAEGHKPPQKDKPAEGDKPVEEDKPPQKDKPAEGDKHVEEDMP 208
>At3g59990.2 68416.m06698 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 86 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKK 265
D AV V S+ KE ++ +KK+E AE +EN +E + + KK
Sbjct: 7 DVAVVAPVVENGGAESSNGKEEQLESELSKKLEIAEDGQEENDGEEGSKAETSTKKKKKK 66
Query: 266 ATMHLRTVMPQK 301
+ +PQ+
Sbjct: 67 NKSKKKKELPQQ 78
>At3g59990.1 68416.m06697 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 86 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKK 265
D AV V S+ KE ++ +KK+E AE +EN +E + + KK
Sbjct: 7 DVAVVAPVVENGGAESSNGKEEQLESELSKKLEIAEDGQEENDGEEGSKAETSTKKKKKK 66
Query: 266 ATMHLRTVMPQK 301
+ +PQ+
Sbjct: 67 NKSKKKKELPQQ 78
>At3g02320.1 68416.m00214 N2,N2-dimethylguanosine tRNA
methyltransferase family protein similar to
N2,N2-dimethylguanosine tRNA methyltransferase [Homo
sapiens] GI:11066198; contains Pfam profile PF02005:
N2,N2-dimethylguanosine tRNA methyltransferase
Length = 599
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKK--SPAKKVEAAESNGKENGTDE-APEDSPAE-NGVPKKA 268
K+E + T P ++K S A K E NG NG E A ED P+ + P K
Sbjct: 51 KQEHEAKSSKRTRPASKVIEKDASEASKEETPSENGMNNGDHEVASEDGPSSVSKDPAKT 110
Query: 269 TMHLRTVMPQKRKRL 313
T P+ K L
Sbjct: 111 TERFAPREPKPPKVL 125
>At1g09520.1 68414.m01067 expressed protein
Length = 260
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 104 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKAT 271
KE A + + E E V +K + KE D+ P+ SPA NG K T
Sbjct: 165 KEAALAKKRAREALEQVVMLDAKEKARSVVPKLKEAPVDQKPKLSPASNGATVKET 220
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 11/71 (15%)
Frame = +2
Query: 89 AAVDKKEVAPEEVTSTEPKESPVKKSPAK-----------KVEAAESNGKENGTDEAPED 235
A+ KKE + TS++ K PVK PAK S KE+ ++ E+
Sbjct: 785 ASSKKKEEPSKATTSSKSKSGPVKSVPAKSKTGKGKAKSGSASTPASKAKESASESESEE 844
Query: 236 SPAENGVPKKA 268
+P E KA
Sbjct: 845 TPKEPEPATKA 855
>At3g18035.1 68416.m02292 histone H1/H5 family protein contains Pfam
domain, PF00538: linker histone H1 and H5 family;similar
to HMG I/Y like protein (GI:15706274) [Glycine
max];similar to HMR1 protein (GI:4218141) [Antirrhinum
majus]; similar to high mobility group protein
(GI:1483173) [Canavalia gladiata]
Length = 480
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 86 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAES-NGKENGTDEAPE 232
+A + V P+ + +P+E+ ++ A++ EAAE+ G+E G + E
Sbjct: 416 EALTVTETVEPQVMEEVQPEETAAPQTEAQQTEAAETQGGQEEGQEREGE 465
>At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 71 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 250
L T + V + EV P EP+E PV +P VE + N T EA S ++N
Sbjct: 140 LTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVET-----RLNLTVEAASSSSSDN 194
>At5g11980.1 68418.m01401 conserved oligomeric Golgi complex
component-related / COG complex component-related
similar to SP|Q96MW5 Conserved oligomeric Golgi complex
component 8 {Homo sapiens}; contains Pfam profile
PF04124: Dor1-like family
Length = 569
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 125 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 250
+ + + P KSP K + + ENG PE+ AEN
Sbjct: 507 ILAASSSQEPSNKSP-KVISTDTKDASENGVASQPEEKQAEN 547
>At5g03380.1 68418.m00291 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP2
[GI:4097545]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 392
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 80 MADAAVDKKEVAPEEVTSTEPKESPV-KKSPAKKVEAA-ESNG--KENGTDEAPEDSPAE 247
++ A KKE P E K SP ++ PA+K AA E G KE E E +
Sbjct: 89 VSTVAPPKKETPPSS-GGAEKKPSPAAEEKPAEKKPAAVEKPGEKKEEKKKEEGEKKASP 147
Query: 248 NGVPKKATMHLRT 286
PK++T+ L+T
Sbjct: 148 PPPPKESTVVLKT 160
>At4g07380.1 68417.m01133 hypothetical protein
Length = 168
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 98 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEA-PEDSPAENGVPKK 265
D + + EEV+ E + K K E ++NG++NGT+ PE + E K+
Sbjct: 85 DPSQQSNEEVSQEEVMVNEETKEVDKMEEETQTNGEDNGTEVINPEIADVELPAKKR 141
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 98 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEA 226
DKKE EEV S PK KK +K EAA E+ +++
Sbjct: 504 DKKEEVIEEVAS--PKSEKKKKKKSKDTEAAVDAEDESAAEKS 544
>At1g76820.1 68414.m08939 expressed protein
Length = 266
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +2
Query: 80 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVE--AAESNGKENGTDEA-PED-SPAE 247
+ ++A KK + T ++ + K A+ E AA E D+A PE +P E
Sbjct: 167 LVESARSKKHKKKNKSGRTLQEDDDLDKLLAELGETPAAGKPASEEEKDQAQPEPVAPVE 226
Query: 248 NGVPKKATMHLRTVMPQKRKR 310
N K+ LR + P+KRKR
Sbjct: 227 NTGEKEKRRLLRLLQPRKRKR 247
>At1g17370.1 68414.m02118 oligouridylate-binding protein, putative
similar to oligouridylate binding protein [Nicotiana
plumbaginifolia] GI:6996560; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 419
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 113 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDS 238
A + TS E K+S KS + +GK+ EAPE++
Sbjct: 215 ATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENN 256
>At5g19950.3 68418.m02375 expressed protein
Length = 441
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 146 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 250
ES VK + +K E++E +G + GT++ + +PA++
Sbjct: 237 ESSVKHAGGEKGESSEVDGNKRGTNKNIQRNPADS 271
>At5g19950.2 68418.m02374 expressed protein
Length = 443
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 146 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 250
ES VK + +K E++E +G + GT++ + +PA++
Sbjct: 237 ESSVKHAGGEKGESSEVDGNKRGTNKNIQRNPADS 271
>At5g19950.1 68418.m02373 expressed protein
Length = 443
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 146 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 250
ES VK + +K E++E +G + GT++ + +PA++
Sbjct: 237 ESSVKHAGGEKGESSEVDGNKRGTNKNIQRNPADS 271
>At5g19420.1 68418.m02314 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1124
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +2
Query: 101 KKEVAPEEVTS--TEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKK-AT 271
+ + P E S T + S SP E+ + G + +P +SP +NGV K +
Sbjct: 161 RSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGVDKAFSD 220
Query: 272 MHLRTVMPQ 298
M L V P+
Sbjct: 221 MSLYAVPPK 229
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 98 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPED---SPAENGVPKKA 268
++K EE+ E K S KS +K+ E E + K++ E E+ SP+ + PKK+
Sbjct: 20 ERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEEVEEEEKSPSPSPSPKKS 79
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVP 259
+K A + + + E KK KK + E T+E PE S E P
Sbjct: 495 EKAAAKAAIRAQKEAEKKEKKEQEKKAKKKTGGNTETETEEVPEASEEEIEAP 547
>At3g62630.1 68416.m07035 expressed protein
Length = 380
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/49 (22%), Positives = 28/49 (57%)
Frame = +2
Query: 119 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKK 265
+++ S++ +E P++++ VE+ + K+ +AP + NG+ K+
Sbjct: 271 KKLKSSQLEEKPIQETVDAAVESKKQKQKQPPAKKAPVNGKPTNGIAKR 319
>At3g24630.1 68416.m03093 hypothetical protein
Length = 724
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 116 PEEVTSTEPKESPVKKSPAKKVEAAESNG-KENGTDEAPEDSPAENGVPKKATMHLRTVM 292
P+ + + ++ VKK+ + E N +E PE++P+EN +R V
Sbjct: 276 PDILKLSSERQEKVKKNSKESPEIVRCNSTREAALQSLPEETPSENPSTIVLIRPMRVVK 335
Query: 293 PQ 298
P+
Sbjct: 336 PE 337
>At3g04850.1 68416.m00526 tesmin/TSO1-like CXC domain-containing
protein similar to CXC domain containing TSO1-like
protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427, CXC
domain protein TSO1 [Arabidopsis thaliana] GI:7767425;
contains Pfam profile PF03638: Tesmin/TSO1-like CXC
domain
Length = 639
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 31 FYSLFKLFHFFNLPCNNGRRSRRQEGSCT 117
FYSL F++ CNN +EGSC+
Sbjct: 229 FYSLASEPQQFSIYCNNSNYVEEREGSCS 257
>At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein
(FLA8)
Length = 420
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 104 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 250
K +P + EP +P SPA ++ TDE+PE +P+++
Sbjct: 334 KSKSPSPAPAPEPVTAPTP-SPADAPSPTAASPPAPPTDESPESAPSDS 381
>At1g44780.1 68414.m05130 expressed protein ; expression supported
by MPSS
Length = 471
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 253 CAEES--NDASENGDATEKKETGVKRKSVA 336
C EE+ ND SEN TE+++ + K VA
Sbjct: 79 CLEEAGNNDTSENSQETEREDDEIPTKEVA 108
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/56 (23%), Positives = 32/56 (57%)
Frame = +2
Query: 86 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 253
DA++ K++ + + + E K+ +K+ + ++E+ + G ++ +DS +ENG
Sbjct: 93 DASLPKEDESSSKQDNQEEKKE--EKTKEEFTPSSETKSETEGGEDQKDDSKSENG 146
>At4g21326.1 68417.m03081 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 690
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -3
Query: 587 LNLNQTQKSSTLHSMRLSVWV*YICRTGYVDVS*TLM 477
+N + + ++ M + ++ Y C TGY D S T++
Sbjct: 536 VNAERAKDPGLVYDMNIDDYIHYFCATGYNDTSITII 572
>At3g18850.2 68416.m02394 phospholipid/glycerol acyltransferase
family protein contains Pfam profile: PF01553
Acyltransferase
Length = 375
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = -1
Query: 253 TIFSRRIFWGFIGTI---LFAITF---C-SFNFLSWRLLDW*FFW 140
T F IFWGF+ + LF+I + C SF F SW L W F +
Sbjct: 30 TAFMMLIFWGFLSAVVLRLFSIRYSRKCVSFFFGSWLAL-WPFLF 73
>At3g18850.1 68416.m02393 phospholipid/glycerol acyltransferase
family protein contains Pfam profile: PF01553
Acyltransferase
Length = 375
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = -1
Query: 253 TIFSRRIFWGFIGTI---LFAITF---C-SFNFLSWRLLDW*FFW 140
T F IFWGF+ + LF+I + C SF F SW L W F +
Sbjct: 30 TAFMMLIFWGFLSAVVLRLFSIRYSRKCVSFFFGSWLAL-WPFLF 73
>At3g02100.1 68416.m00176 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 464
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 230 EDSPAENGVPKKATMHLRTVMPQKRKRLV*R 322
EDSP E +P K + + MP+K + L+ R
Sbjct: 81 EDSPEERNIPGKLSESVLRFMPKKVEELIER 111
>At1g68030.1 68414.m07772 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 314
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 146 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 253
E+ + SP + E S+GKEN P D P G
Sbjct: 150 ENDTQVSPCSEEETLRSDGKENDRVTPPMDEPDLTG 185
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 98 DKKEVAPEEVTSTEPKESPVKKSPA--KKVEAAESNGKENGTDEAPEDSPAENGV 256
DKKE +E K ++ S K + + +E+ DE ED P +NG+
Sbjct: 4517 DKKEEEEKEQDDVLGKNKGIEMSDEFDGKEYSVSEDEEEDKEDEGSEDEPLDNGI 4571
>At1g54080.2 68414.m06163 oligouridylate-binding protein, putative
similar to oligouridylate binding protein GI:6996560
from [Nicotiana plumbaginifolia]
Length = 430
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 113 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 241
A + T E K S KS + + +G+E ++APE++P
Sbjct: 228 ATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNP 270
>At1g54080.1 68414.m06162 oligouridylate-binding protein, putative
similar to oligouridylate binding protein GI:6996560
from [Nicotiana plumbaginifolia]
Length = 426
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 113 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 241
A + T E K S KS + + +G+E ++APE++P
Sbjct: 224 ATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNP 266
>At1g04430.1 68414.m00434 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 623
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 276 CIVAFFGT---PFSAGESSGASSVPFSLPLLSAASTFLAGDFLTGDS 145
C+VA F + S GAS++ + L S++L+GD GD+
Sbjct: 19 CVVALFVCFLFMYYGSSSQGASALEYGRSLRKLGSSYLSGDDDNGDT 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,923,342
Number of Sequences: 28952
Number of extensions: 201779
Number of successful extensions: 885
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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