Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31016.Seq
(489 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 23 1.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 3.4
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 4.5
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 6.0
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 7.9
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 317 HTLKGECRHMLLHHWPFL 264
HT + +C H LL H P L
Sbjct: 352 HTPEPDCIHELLGHMPLL 369
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 369 EQRADWLHLAKTRVNTPRKLPQPW 440
++ A +H R+ P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 271 GQWCNSICRHSP 306
G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 369 EQRADWLHLAKTRVNTPRKLPQPW 440
++ A +H R+ P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 271 GQWCNSICRHSP 306
G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 369 EQRADWLHLAKTRVNTPRKLPQPW 440
++ A +H R+ P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 271 GQWCNSICRHSP 306
G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 369 EQRADWLHLAKTRVNTPRKLPQPW 440
++ A +H R+ P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 271 GQWCNSICRHSP 306
G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 3.4
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +3
Query: 75 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYR 230
HI R + S + ++ KS+P+RK E++ + +K ++ R
Sbjct: 576 HIMRSITESGGRRRQTREKRKKSLPVRKLLELERAQHEFKNGDSSSLLDKMR 627
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.4 bits (43), Expect = 4.5
Identities = 6/28 (21%), Positives = 17/28 (60%)
Frame = +3
Query: 192 KGQQVGKVMQVYRKKFVVYIEGFKEKRP 275
+G +V K+ ++Y + Y++ ++ +P
Sbjct: 473 EGWKVEKIQEIYLEALRAYVDNRRKPKP 500
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -3
Query: 343 FIHLQLDNHTL*RVNADICCCTIGLFSLN 257
F +L+N++L +N + +GL+ LN
Sbjct: 316 FCKKKLENYSLQLINHRVVFTAMGLYVLN 344
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.9
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +3
Query: 36 RRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVK 140
+R+ RH + + R ++P S Q FN +
Sbjct: 275 QRRTHTRHTTTSHNTRGTPRTTPASSRCGQLFNTE 309
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,810
Number of Sequences: 336
Number of extensions: 2610
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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