Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31015.Seq
(499 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 25 0.38
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 2.7
AY600516-1|AAT11864.1| 143|Tribolium castaneum optomotor-blind-... 22 2.7
AY600515-1|AAT11863.1| 134|Tribolium castaneum optomotor-blind-... 22 2.7
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 2.7
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 22 3.5
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 6.2
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 6.2
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 6.2
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 8.1
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 8.1
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 25.0 bits (52), Expect = 0.38
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -3
Query: 206 ESLLVVAASDTKYIALPF-IA*LISLYFGAHALFVKDTKLVLVHHFEQ 66
++L VVA + TK LPF + +I + F + FV T+++ V ++EQ
Sbjct: 97 QNLKVVATTKTKAWFLPFVVTNIIFVLFHTYEAFVW-TRIMGVAYYEQ 143
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 22.2 bits (45), Expect = 2.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 79 TTSNNFWHPVAGYETFNFMTAVNP 8
+TSNN WH G + N NP
Sbjct: 370 STSNNRWHNNNGNNSNNHWRKNNP 393
>AY600516-1|AAT11864.1| 143|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 143
Score = 22.2 bits (45), Expect = 2.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRI 101
M ++ P+TG Q + +VV HKL++
Sbjct: 54 MYIHPDSPSTGEQWMQKVVSFHKLKL 79
>AY600515-1|AAT11863.1| 134|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 134
Score = 22.2 bits (45), Expect = 2.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRI 101
M ++ P+TG Q + +VV HKL++
Sbjct: 54 MYIHPDSPSTGEQWMQKVVSFHKLKL 79
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 284 GAXCNMSGPLHQKTNTAVCQDALFH 210
G+ +MSG +HQ N + +L H
Sbjct: 196 GSWLDMSGGMHQMANYSTDYSSLTH 220
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.8 bits (44), Expect = 3.5
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +2
Query: 317 GCIXDANLSVLGSCYC 364
GC+ N V CYC
Sbjct: 260 GCLIQFNTIVFSFCYC 275
Score = 21.8 bits (44), Expect = 3.5
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +2
Query: 317 GCIXDANLSVLGSCYC 364
GC+ N V CYC
Sbjct: 541 GCLIQFNTIVFAFCYC 556
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 6.2
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -2
Query: 183 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 55
Q H H P IH P+L + +PP+ ++S I
Sbjct: 88 QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 6.2
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -2
Query: 183 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 55
Q H H P IH P+L + +PP+ ++S I
Sbjct: 88 QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 6.2
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -2
Query: 183 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 55
Q H H P IH P+L + +PP+ ++S I
Sbjct: 88 QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 20.6 bits (41), Expect = 8.1
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 230 KQPCSSSDAKGHSCYR-XRRDGE 295
+Q ++KG SCYR R+G+
Sbjct: 302 RQMYDRGESKGSSCYRLLSRNGQ 324
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 20.6 bits (41), Expect = 8.1
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -2
Query: 183 QRHEVHSPSIHRLTDQPLL 127
Q H H P IH P+L
Sbjct: 88 QLHSHHGPPIHHQIRPPIL 106
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,245
Number of Sequences: 336
Number of extensions: 2238
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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