Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31014.Seq
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    26   0.13 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   0.51 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   2.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.8  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 25.8 bits (54), Expect = 0.13
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 267 VTNHFSVIHEYYPVNAVSLSIL 332
           V+N F  +H YYPV  +S  +L
Sbjct: 103 VSNVFDFVHFYYPVATMSFYVL 124


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 0.51
 Identities = 10/39 (25%), Positives = 15/39 (38%)
 Frame = +3

Query: 45  RIRTSKCRFSQSYRHLIGHERQRSGGSNQLLLRATQRTC 161
           R+   KC F   Y+H + +  +   GS          TC
Sbjct: 230 RLTCPKCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYTC 268


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 15/47 (31%), Positives = 17/47 (36%)
 Frame = +2

Query: 74   TELSAPYWARATKEWWK*PTASACHTKNMPIKSKRNLITRWMFTS*T 214
            TE   P W      WW   T S   T      ++R   TR   TS T
Sbjct: 1028 TEHMHPDWTTKPSTWWSSTTTSPWWTTT---TTRRTTTTRPTTTSTT 1071


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +3

Query: 33  SNCGRIRTSKCRFSQSYRHLIGHERQRSGG 122
           S  GRI   KC         + H RQ  GG
Sbjct: 630 SGAGRITCEKCGNKIDTSLFVDHIRQCVGG 659


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,918
Number of Sequences: 336
Number of extensions: 1614
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)