Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31014.Seq
         (349 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    24   1.4  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    22   7.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   7.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            21   9.9  

>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 56  VEMQILTELSAPYWARATKEWWK 124
           + + +LT L+A YW R    +W+
Sbjct: 3   ISLLVLTLLAAVYWIRQRLAYWE 25


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 6   CEGPSCCFISNCGRIRTSKCRFSQS 80
           C+     FISN GR+   +C  S +
Sbjct: 325 CQNCGRLFISNNGRVSCCRCMKSST 349


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 163 RHVLCVARRSSWLLPPLLCRSC 98
           R  +C  +RS    P LLC SC
Sbjct: 40  RDQVCCVQRSPPHWPYLLCSSC 61


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 22   VVLFQIVDAYERRNADSHRVIGTLLGTS 105
            +V  ++VDAYE+ +     V   +L T+
Sbjct: 2997 IVTLRMVDAYEKSSIPGFSVFLQILSTA 3024


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,393
Number of Sequences: 2352
Number of extensions: 7031
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)