Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31014.Seq
         (349 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47808-5|CAA87773.1|  294|Caenorhabditis elegans Hypothetical pr...    58   2e-09
AF067219-13|AAC17024.1|  362|Caenorhabditis elegans Proteasome r...    44   3e-05
Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical pr...    30   0.52 
Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical pr...    28   2.1  
AL132951-5|CAC44307.1|  426|Caenorhabditis elegans Hypothetical ...    28   2.1  
Z70286-2|CAA94290.1|  529|Caenorhabditis elegans Hypothetical pr...    27   2.8  
AJ582071-1|CAE46541.1|  529|Caenorhabditis elegans flavin monoox...    27   2.8  
AF067617-4|AAC17557.1|  381|Caenorhabditis elegans Hypothetical ...    27   2.8  
Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...    27   4.9  
AL110482-6|CAB60339.1|  179|Caenorhabditis elegans Hypothetical ...    27   4.9  
AF016423-8|AAB65319.1|  409|Caenorhabditis elegans Hypothetical ...    26   8.5  

>Z47808-5|CAA87773.1|  294|Caenorhabditis elegans Hypothetical
           protein D2013.7 protein.
          Length = 294

 Score = 57.6 bits (133), Expect = 2e-09
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
 Frame = +1

Query: 1   ISVKVHPVVLFQIVDAYERR------NADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHA 162
           ++V VHP V   +VD + RR      N    + +GTL+G  +KG ++VTNCF +P  E  
Sbjct: 5   LTVNVHPGVYMNVVDTHMRRTKSSAKNTGQEKCMGTLMGYYEKGSIQVTNCFAIPFNESN 64

Query: 163 DQVEAELNYAMDVYELNXRVNSSESIXGLWALAMK*PTTSLL 288
           D +E +  +   +     + + +E   G W L     T+S L
Sbjct: 65  DDLEIDDQFNQQMISALKKTSPNEQPVG-WFLTTSDITSSCL 105


>AF067219-13|AAC17024.1|  362|Caenorhabditis elegans Proteasome
           regulatory particle,non-atpase-like protein 8 protein.
          Length = 362

 Score = 44.0 bits (99), Expect = 3e-05
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
 Frame = +1

Query: 7   VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKG-VVEVTNCFCVPHKEHADQVEA 177
           V VHP+VL  +VD + R  +     RV+G LLG+  K   +++ N F VP  E       
Sbjct: 41  VTVHPLVLLSVVDHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKST 100

Query: 178 ---ELNYAMDVYELNXRVNSSESIXG 246
              +++Y   +Y +  +V + E I G
Sbjct: 101 WFLDMDYLESMYGMFYKVAAKEKIVG 126


>Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical
           protein F36H1.9 protein.
          Length = 160

 Score = 29.9 bits (64), Expect = 0.52
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 131 TASACHTKNMPIKSKRNLITRWMFTS 208
           T  ACHT  M +  K+N IT W +++
Sbjct: 55  TLVACHTLQMFLAEKKNTITHWKYST 80


>Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical
           protein F01D5.1 protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 118 PLLCRSCPIRCR*LCENLHFDVRMRPQFEIKQQD 17
           PLL  SCP+ C+ LC        + P F+ K  D
Sbjct: 44  PLLKESCPVTCK-LCPPTEAPTTLAPCFDDKDTD 76


>AL132951-5|CAC44307.1|  426|Caenorhabditis elegans Hypothetical
           protein Y67H2A.6 protein.
          Length = 426

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +1

Query: 7   VKVHPVVLFQIVDAYERRNADS----HRVIGTLLGTSDKGVVEVTNCF 138
           V +HP+V+ Q+ + Y R          +V G +LG  +   VE  N F
Sbjct: 14  VLLHPLVIMQMSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSF 61


>Z70286-2|CAA94290.1|  529|Caenorhabditis elegans Hypothetical
           protein K08C7.5 protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 172 RLDRHVLCVARRSSWLLPPLLCRSCP 95
           R+ + V  V RR +WL+P L  R  P
Sbjct: 205 RIAKQVYLVTRRGTWLIPKLETRGLP 230


>AJ582071-1|CAE46541.1|  529|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 172 RLDRHVLCVARRSSWLLPPLLCRSCP 95
           R+ + V  V RR +WL+P L  R  P
Sbjct: 205 RIAKQVYLVTRRGTWLIPKLETRGLP 230


>AF067617-4|AAC17557.1|  381|Caenorhabditis elegans Hypothetical
           protein T04D1.2 protein.
          Length = 381

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 26  FYFKLWTHTNVEMQILTELSAPYWARA 106
           FY  +W+ T V  + LT     YW R+
Sbjct: 118 FYDMMWSQTTVSYRFLTTPPVTYWIRS 144


>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 106 DKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYE 207
           D G  EV   +   H EH    +  + Y++DV E
Sbjct: 103 DNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDVCE 136


>AL110482-6|CAB60339.1|  179|Caenorhabditis elegans Hypothetical
           protein Y39G8B.7 protein.
          Length = 179

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 124 LPPLLCRSCPIRCR*LCENLHFDVRMRPQFEIK 26
           L PLL +SCP+ C  LC +      + P F+ K
Sbjct: 43  LLPLLTQSCPVTCN-LCPSTVSPTTLAPCFDDK 74


>AF016423-8|AAB65319.1|  409|Caenorhabditis elegans Hypothetical
           protein F40A3.7 protein.
          Length = 409

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 71  LTELSAPYWARATKEWWK*P 130
           L  +  P +ARAT  WWK P
Sbjct: 127 LLGIQNPLYARATWRWWKLP 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,198,156
Number of Sequences: 27780
Number of extensions: 151301
Number of successful extensions: 343
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)