Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31014.Seq
         (349 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   1.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   3.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   3.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   3.2  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   4.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   7.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   9.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   9.6  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 142 RRSSWLLPPLLCRSCPIRCR 83
           RRS  + PP    +CP+ C+
Sbjct: 333 RRSEPVEPPRRKNNCPLHCK 352


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 184 NYAMDVYELNXRVNSSE 234
           NY  DVY+ N  V+S E
Sbjct: 7   NYYGDVYQWNHTVSSGE 23


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
 Frame = +3

Query: 6   CEGPSCCFISNCGRIRTSKCRFSQSY-----RHLIGHERQRSGGSNQLLLRAT 149
           C     C I    R R   CR+ +       R  +  ERQR+   +Q  + +T
Sbjct: 146 CREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVEST 198


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
 Frame = +3

Query: 6   CEGPSCCFISNCGRIRTSKCRFSQSY-----RHLIGHERQRSGGSNQLLLRAT 149
           C     C I    R R   CR+ +       R  +  ERQR+   +Q  + +T
Sbjct: 146 CREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVEST 198


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 276 HFSVIHEYYPVNAVSLSILLW 338
           HF+ +  +Y V+    ++LLW
Sbjct: 96  HFTALGNFYFVHESLKNVLLW 116


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 294 EYYPVNAVSLSILLW 338
           EY P NA+ + I +W
Sbjct: 61  EYIPENALPVGIEIW 75


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 14/68 (20%), Positives = 27/68 (39%)
 Frame = +1

Query: 10  KVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNY 189
           +++P   F      E +N    R    + G ++     V   +   +    +  E +L+Y
Sbjct: 164 EIYPNYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKYMREYNDPEYKLDY 223

Query: 190 AMDVYELN 213
            M+  ELN
Sbjct: 224 FMEDVELN 231


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 14/68 (20%), Positives = 27/68 (39%)
 Frame = +1

Query: 10  KVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNY 189
           +++P   F      E +N    R    + G ++     V   +   +    +  E +L+Y
Sbjct: 164 EIYPNYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKNMREYNDPEYKLDY 223

Query: 190 AMDVYELN 213
            M+  ELN
Sbjct: 224 FMEDVELN 231


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 48  IRTSKCRFSQSYRHLIGHERQ 110
           +  + CRFS   +  +G ERQ
Sbjct: 463 VEEAACRFSAVAQAQLGGERQ 483


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,561
Number of Sequences: 438
Number of extensions: 2034
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)