Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31005.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 141 4e-34
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 134 3e-32
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 128 3e-30
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 128 3e-30
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 126 9e-30
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 126 9e-30
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 122 3e-28
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 121 4e-28
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 84 8e-17
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 81 8e-16
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 74 7e-14
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 74 7e-14
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 65 4e-11
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 38 0.004
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 38 0.007
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 32 0.36
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 27 7.7
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 27 7.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 141 bits (341), Expect = 4e-34
Identities = 63/88 (71%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSS 424
P +T+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 425 MVLTKMKETAEAYLGKTVQNAVITVPAY 508
MVL KMKETAEA+LG TV++AV+TVPAY
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAVVTVPAY 150
Score = 126 bits (304), Expect = 1e-29
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 243 MNPN 254
MNP+
Sbjct: 61 MNPH 64
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
NDSQRQATKDAG I+GLNVLRIINE
Sbjct: 152 NDSQRQATKDAGAIAGLNVLRIINE 176
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 134 bits (325), Expect = 3e-32
Identities = 60/88 (68%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSS 424
P +T+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 425 MVLTKMKETAEAYLGKTVQNAVITVPAY 508
MVL KMK+TAEA+L TV++AV+TVP Y
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAVVTVPTY 150
Score = 126 bits (304), Expect = 1e-29
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 243 MNPN 254
MNP+
Sbjct: 61 MNPH 64
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
NDSQRQATKDAG I+GLNVLRIINE
Sbjct: 152 NDSQRQATKDAGAIAGLNVLRIINE 176
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 128 bits (309), Expect = 3e-30
Identities = 58/87 (66%), Positives = 72/87 (82%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VL KMKETAE YLG TV++AVITVPAY
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAY 149
Score = 110 bits (265), Expect = 6e-25
Identities = 49/68 (72%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNP-NTQY 263
NP NT +
Sbjct: 61 RNPENTVF 68
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
NDSQRQATKDA TI+GLN +RIINE
Sbjct: 151 NDSQRQATKDAATIAGLNAIRIINE 175
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 128 bits (309), Expect = 3e-30
Identities = 58/87 (66%), Positives = 72/87 (82%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VL KMKETAE YLG TV++AVITVPAY
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAY 149
Score = 110 bits (265), Expect = 6e-25
Identities = 49/68 (72%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNP-NTQY 263
NP NT +
Sbjct: 61 RNPENTVF 68
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
NDSQRQATKDA TI+GLN +RIINE
Sbjct: 151 NDSQRQATKDAATIAGLNAIRIINE 175
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 126 bits (305), Expect = 9e-30
Identities = 56/87 (64%), Positives = 70/87 (80%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++TIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VL KMKE AE+YLGK V+NAV+TVPAY
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPAY 180
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 251
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
ND+QRQATKDAGTI+GLNV+RIINE
Sbjct: 182 NDAQRQATKDAGTIAGLNVVRIINE 206
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 126 bits (305), Expect = 9e-30
Identities = 56/87 (64%), Positives = 70/87 (80%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++TIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VL KMKE AE+YLGK V+NAV+TVPAY
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPAY 180
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 251
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
ND+QRQATKDAGTI+GLNV+RIINE
Sbjct: 182 NDAQRQATKDAGTIAGLNVVRIINE 206
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 122 bits (293), Expect = 3e-28
Identities = 55/87 (63%), Positives = 71/87 (81%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VL KMKETAEA LG +V++AVITVPAY
Sbjct: 123 VLQKMKETAEAVLGHSVRDAVITVPAY 149
Score = 110 bits (264), Expect = 8e-25
Identities = 49/68 (72%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNP-NTQY 263
NP NT +
Sbjct: 61 RNPENTVF 68
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
NDSQRQATKDA TI+GLN +RIINE
Sbjct: 151 NDSQRQATKDAATIAGLNAIRIINE 175
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 121 bits (291), Expect = 4e-28
Identities = 54/87 (62%), Positives = 68/87 (78%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++TIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+M
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAM 150
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VLTKMK+ AE+YLG V+NAV+TVPAY
Sbjct: 151 VLTKMKQIAESYLGHEVKNAVVTVPAY 177
Score = 98.7 bits (235), Expect = 3e-21
Identities = 46/59 (77%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 251
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/25 (80%), Positives = 25/25 (100%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
ND+Q+QATKDAG+I+GLNV+RIINE
Sbjct: 179 NDAQKQATKDAGSIAGLNVVRIINE 203
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 83.8 bits (198), Expect = 8e-17
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMV 430
+T+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V + V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVGAFV 148
Query: 431 LTKMKETAEAYLGKTVQNAVITVPAY 508
L KMKETAE+YLG TV NAV+TVPAY
Sbjct: 149 LMKMKETAESYLGTTVNNAVVTVPAY 174
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 246 N-PNTQYS 266
N NT ++
Sbjct: 90 NSANTLFA 97
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
NDSQRQATKDAG ISGLNVLR+INE
Sbjct: 176 NDSQRQATKDAGQISGLNVLRVINE 200
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 80.6 bits (190), Expect = 8e-16
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMV 430
+T+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V + V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVGAFV 148
Query: 431 LTKMKETAEAYLGKTVQNAVITVPAY 508
L KMKETAE+YLG TV N V+TVPAY
Sbjct: 149 LMKMKETAESYLGTTVNNPVVTVPAY 174
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 246 N-PNTQYS 266
N NT ++
Sbjct: 90 NSANTLFA 97
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
NDSQRQATKDAG ISGLNVLR+INE
Sbjct: 176 NDSQRQATKDAGQISGLNVLRVINE 200
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 74.1 bits (174), Expect = 7e-14
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 430
+++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 431 LTKMKETAEAYLGKTVQNAVITVPAY 508
L +K AE LG V++AVITVPAY
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAY 146
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 254
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 255 TQYSMPNV 278
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
N +QR+AT++A I+GL VLRI+NE
Sbjct: 148 NATQRRATEEAAEIAGLKVLRILNE 172
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 74.1 bits (174), Expect = 7e-14
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 430
+++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 431 LTKMKETAEAYLGKTVQNAVITVPAY 508
L +K AE LG V++AVITVPAY
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAY 146
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 254
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 255 TQYSMPNV 278
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINE 585
N +QR+AT++A I+GL VLRI+NE
Sbjct: 148 NATQRRATEEAAEIAGLKVLRILNE 172
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEV 418
P+ TI+DAKR IGR FE + +D K +PF++ D GK ++ K +PEE+
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 419 SSMVLTKMKETAEAYLGKTVQNAVITVPA 505
S+++ +K A +LG T+ VI+ PA
Sbjct: 155 GSLIIGYLKSAAAKHLGVTLGQVVISCPA 183
Score = 47.2 bits (107), Expect = 9e-06
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 54 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 218
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 219 DAAKNQVAMNP 251
A Q NP
Sbjct: 85 TRATEQQEHNP 95
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 QHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSM 427
++T+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V +
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAA 120
Query: 428 VLTKMKETAEAYLG--KTVQNAVITVPAY 508
+LTK++ E+ L K V + V+ VP+Y
Sbjct: 121 LLTKLRTIVESQLSDVKKVSDCVLAVPSY 149
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 248
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTN 59
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 478 AECSYHGSRVLNDSQRQATKDAGTISGLNVLRIINET 588
++C D QR+A A +GLN LRI+NET
Sbjct: 140 SDCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNET 176
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSS 424
PQ + +I RK D K +PF D + + YK E+K + E + +
Sbjct: 70 PQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLA 127
Query: 425 MVLTKMKETAEAYLGKTVQNAVITVPAY 508
M+L K+ EAY +TV++ VITVP +
Sbjct: 128 MILWNAKKVTEAYADQTVKDVVITVPIF 155
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSS 424
PQ + +I RK D K +PF D + + YK E+K + E + +
Sbjct: 86 PQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLA 143
Query: 425 MVLTKMKETAEAYLGKTVQNAVITVPAY 508
M+L K+ EAY +TV++ VITVP +
Sbjct: 144 MILWNAKKVTEAYADQTVKDVVITVPIF 171
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 254
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 255 TQYSMPN 275
+ N
Sbjct: 86 LVHGQLN 92
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 156 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCKP 317
D G+ ++V D +++IG+ + + NT+Y++ + SS+++L +P
Sbjct: 12 DIGDGLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 156 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCKP 317
D G+ ++V D + +IG+ + + NT+Y++ + S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 135 KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCK 314
K+ I+ N +G T YV D + IG+ + + NT+Y++ + S+++L +
Sbjct: 5 KLTILDNGEGLFQTHVYVK--DVQEAIGEQMNTESRLGENTKYTVVGDGNGFMSRVVLVE 62
Query: 315 P 317
P
Sbjct: 63 P 63
>Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical
protein W02B8.4 protein.
Length = 733
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +2
Query: 257 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 436
T+ AKR I R E T+++D PF +++ +K A K +D+ + ++L
Sbjct: 205 TVRRAKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVK-ALKKKDRI---SKWQDIILR 260
Query: 437 KMKETAEAYLGKTVQN 484
KE+++ K ++N
Sbjct: 261 IQKESSQLRKRKEIEN 276
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 170 DHSVLCCVHRHRASHRRCRQEPGGDEPQH 256
D V+CCVH R S+ + Q+ D+ Q+
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQY 51
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 224 RQEPGGDEPQHTIFDAKRLIGRKFEDATVQAD 319
++ GD+P F +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 194 HRHRASHRR--CRQEPGGDEPQHTIFDAKRLIGR-KFEDATVQADM 322
H+HR SHR Q+ GDE + + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,937,421
Number of Sequences: 27780
Number of extensions: 339344
Number of successful extensions: 1100
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -