Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30998.Seq
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47811-3|CAA87787.2|  723|Caenorhabditis elegans Hypothetical pr...    66   2e-11
AF489839-1|AAN09795.1|  723|Caenorhabditis elegans lim and trans...    66   2e-11
U39998-7|AAK71422.2|  100|Caenorhabditis elegans Hypothetical pr...    59   2e-09
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    38   0.005
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    38   0.005
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    36   0.029
L08403-3|AAT92076.1|  335|Caenorhabditis elegans Hypothetical pr...    35   0.051
Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical pr...    32   0.27 
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    31   0.47 
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter...    31   0.47 
AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical ...    30   1.1  
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z79603-10|CAI79233.1|  224|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z81458-4|CAB03824.1|  623|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ...    29   3.3  
AF023454-1|AAB82794.1|  707|Caenorhabditis elegans protein phosp...    28   5.8  
AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm rece...    28   5.8  
AF003389-11|AAC71139.2|  707|Caenorhabditis elegans Phosphatase ...    28   5.8  

>Z47811-3|CAA87787.2|  723|Caenorhabditis elegans Hypothetical
           protein K02C4.4 protein.
          Length = 723

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = +3

Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHVPKIGPGHLDNSSVGIRSALNVPKSNNY 431
           FKC +CGT+L LKTY NN++   DKEVYCS+HVP  GP  L  +S    S  N+  +N+ 
Sbjct: 34  FKCYICGTRLALKTYCNNRNDINDKEVYCSNHVPIAGPHDLPMASTN-GSGKNLENNNHV 92

Query: 432 VN 437
            N
Sbjct: 93  KN 94



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 172 CFRCNEIVYQVDRVGPLKDFTFFHSGC 252
           C RC + VY  D+VGPLKD TFFH GC
Sbjct: 7   CNRCGKQVYPTDKVGPLKDSTFFHQGC 33


>AF489839-1|AAN09795.1|  723|Caenorhabditis elegans lim and
           transglutaminase domainprotein protein.
          Length = 723

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = +3

Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHVPKIGPGHLDNSSVGIRSALNVPKSNNY 431
           FKC +CGT+L LKTY NN++   DKEVYCS+HVP  GP  L  +S    S  N+  +N+ 
Sbjct: 34  FKCYICGTRLALKTYCNNRNDINDKEVYCSNHVPIAGPHDLPMASTN-GSGKNLENNNHV 92

Query: 432 VN 437
            N
Sbjct: 93  KN 94



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 172 CFRCNEIVYQVDRVGPLKDFTFFHSGC 252
           C RC + VY  D+VGPLKD TFFH GC
Sbjct: 7   CNRCGKQVYPTDKVGPLKDSTFFHQGC 33


>U39998-7|AAK71422.2|  100|Caenorhabditis elegans Hypothetical
           protein ZK622.4 protein.
          Length = 100

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = +3

Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHVPKIGP 365
           FKC +CGT+L+LKTY+NN++   D EVYC+ HVP  GP
Sbjct: 32  FKCWICGTRLSLKTYHNNRNDNTDLEVYCAGHVPTPGP 69



 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +1

Query: 172 CFRCNEIVYQVDRVGPLKDFTFFHSGC 252
           CFRC    Y  D++GPLKD + FH GC
Sbjct: 5   CFRCKRPTYFNDKMGPLKDGSMFHKGC 31


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 25/93 (26%), Positives = 41/93 (44%)
 Frame = +1

Query: 301 ITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQN 480
           +TS    +   +   T   S  +T T+P       +T P   TT  + S  T  +  S +
Sbjct: 458 VTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSS 517

Query: 481 CLRSGATNGEASTRLQQGSYRVIPLTTSTGDST 579
            + S A++ ++ST  QQ S      TT++ D T
Sbjct: 518 -VSSTASSTQSSTSTQQSSTTTKSETTTSSDGT 549



 Score = 34.7 bits (76), Expect = 0.051
 Identities = 26/76 (34%), Positives = 36/76 (47%)
 Frame = +1

Query: 367 ATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGATNGEASTRLQQGSYRV 546
           +T +TP   S  LST      +ST  S+ T+ +A S   L+   T  E ST     S   
Sbjct: 672 STSSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQESTTTSEEST--TDSSTTT 729

Query: 547 IPLTTSTGDSTPAPST 594
           I   TST  S+P+ +T
Sbjct: 730 IS-DTSTTSSSPSSTT 744


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 25/93 (26%), Positives = 41/93 (44%)
 Frame = +1

Query: 301 ITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQN 480
           +TS    +   +   T   S  +T T+P       +T P   TT  + S  T  +  S +
Sbjct: 458 VTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSS 517

Query: 481 CLRSGATNGEASTRLQQGSYRVIPLTTSTGDST 579
            + S A++ ++ST  QQ S      TT++ D T
Sbjct: 518 -VSSTASSTQSSTSTQQSSTTTKSETTTSSDGT 549



 Score = 34.7 bits (76), Expect = 0.051
 Identities = 26/76 (34%), Positives = 36/76 (47%)
 Frame = +1

Query: 367 ATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGATNGEASTRLQQGSYRV 546
           +T +TP   S  LST      +ST  S+ T+ +A S   L+   T  E ST     S   
Sbjct: 672 STSSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQESTTTSEEST--TDSSTTT 729

Query: 547 IPLTTSTGDSTPAPST 594
           I   TST  S+P+ +T
Sbjct: 730 IS-DTSTTSSSPSSTT 744


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 35.5 bits (78), Expect = 0.029
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
 Frame = +1

Query: 304 TSIGRKTKKYTAL-ATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGT--AMS 474
           T++G+ T   TA  +T+  +  A+ TT Q      ST  + I+T+T ++  +S      +
Sbjct: 281 TTVGKTTTVTTAQNSTWAATTTASNTTTQ-PVVTTSTSTQGISTTTAQATPSSSVIPTTT 339

Query: 475 QNCLRSGATNGEASTRLQQGSYRVIPLTTSTGDSTPAPST 594
           Q   R  +T   ++    QG+    P+ ++T  S+ APST
Sbjct: 340 QTTQRPTSTGIPSTVSTSQGTSSTSPIPSTTQTSSSAPST 379


>L08403-3|AAT92076.1|  335|Caenorhabditis elegans Hypothetical
           protein F42H10.3 protein.
          Length = 335

 Score = 34.7 bits (76), Expect = 0.051
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = +3

Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHVPKIGPGHLDNSSVGIRSALNVPKSNN 428
           FKC VCG  L +K Y        DK  YC  H PK     + ++    R A N    +N
Sbjct: 32  FKCTVCGMTLNMKNYKG-----YDKRPYCDPHYPKTVASVMADTPEMRRIAENTKNQSN 85


>Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical
           protein C49C3.13 protein.
          Length = 499

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 24/95 (25%), Positives = 40/95 (42%)
 Frame = +1

Query: 298 TITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQ 477
           T+T+  + T   T   T   +   T TTP       +T P   TT +  +E TS T  + 
Sbjct: 256 TVTTT-KPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTT 314

Query: 478 NCLRSGATNGEASTRLQQGSYRVIPLTTSTGDSTP 582
                  T   ++T     +++   +TT+T  +TP
Sbjct: 315 TTTAPTTTTTASTT-----TFKTTTITTTTQTTTP 344


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = +1

Query: 340  LATYQRSVRATWTTPQWASEALS-TCPKAITTSTNRSEDTSGTAMSQNCLRSGATNGEAS 516
            ++T Q S   +      AS A S T P +  T ++ S  T G+ MSQ+   +  T+   S
Sbjct: 1739 MSTSQGSSAGSTVVSSTASPAASSTAPSSTGTMSSTSSGTVGSTMSQSSTAASTTSHTGS 1798

Query: 517  T-RLQQGSYRVIPLTTSTGDS 576
            T  L   S     ++TS G S
Sbjct: 1799 TVTLGSSSTSSNQMSTSQGSS 1819



 Score = 30.7 bits (66), Expect = 0.82
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = +1

Query: 292  PITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTS--GT 465
            P   +S+G      +  A+       +  + Q    ++ST   AI TST +S  T+  G+
Sbjct: 752  PSQSSSVGSSQGSTSPAASTTSGEMTSQGSTQTPGSSVSTSA-AILTSTQQSVSTNSPGS 810

Query: 466  AMSQNCLRSGATNGEASTRLQQGSYRVIPLTTSTGDSTPAPST 594
             +++    SG+T+  ++  +  GS       +S   S+PAPST
Sbjct: 811  TVTRPSTVSGSTSSGSTVTV--GSTEASTSGSSVASSSPAPST 851


>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 6 protein.
          Length = 1254

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 23/91 (25%), Positives = 40/91 (43%)
 Frame = +1

Query: 322 TKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGAT 501
           T++ T       + + T T    ++E  ST  KA TT    + D   T  +++     AT
Sbjct: 601 TEEPTTAEKSTATQKPTTTQESVSTEKTSTTKKASTTEEPTTTDEP-TTTTESSTTGKAT 659

Query: 502 NGEASTRLQQGSYRVIPLTTSTGDSTPAPST 594
             E ST  ++ +   + +TT    +T  P+T
Sbjct: 660 TPELSTTSEETTTTELKITTEGSTTTEEPTT 690


>AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical
           protein K07D4.6 protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
 Frame = +1

Query: 139 KMYRPNFYESTCFRCNEIVYQV---DRVGPLKDFTFFHSGCLSVPCAEPN*P*RPITITS 309
           K  R + YE++     EI       DR+   +  T  HS   +VP         P T T+
Sbjct: 212 KCPRGSIYEASDLDAEEIQLACSVDDRIPLFRTTTTTHSSLTAVPGTTEETSTEPETTTT 271

Query: 310 IGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTS 459
               T+  T  +T  ++     T+    S   +T     TT+T  S  TS
Sbjct: 272 STTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTTTTTTSTTTS 321


>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
           protein C49C3.4 protein.
          Length = 1566

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
 Frame = +1

Query: 295 ITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMS 474
           IT T+    T +  A  T   +  A+ TT   AS   +T   + TT+   S  T+G A S
Sbjct: 488 ITTTTAAATTTEPLASTT---TGEASSTTTGEASST-TTGEASSTTTGEASSTTTGEASS 543

Query: 475 QNCLR-SGATNGEASTRLQQGSYRVIPLTTSTGDSTPAPST 594
                 S  T GEAS+    G    +  TTS+  ST   ST
Sbjct: 544 TTTGEASSTTTGEASSTTT-GEATSVAATTSSASSTVVTST 583


>U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical
           protein F59A6.3 protein.
          Length = 786

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = +1

Query: 304 TSIGRKTKKYTALATYQRSVRATWTTPQWAS-EALSTCPKAITTSTNRSEDTSGTAMSQN 480
           TS G  T     L+T   S  +T + P   S   +ST P A TTS +    TSG + S  
Sbjct: 505 TSSGPSTVSERTLST--TSGPSTTSGPSTTSGSTVSTTPGASTTSGSTQSTTSGPSTS-- 560

Query: 481 CLRSGATNGEASTRLQQGSYRVIPLTTSTGDSTPAPST 594
              SG +    ST          P TTS   +T  PST
Sbjct: 561 ---SGPSTASRSTVSTTSG----PSTTSGPSTTSGPST 591


>U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical
           protein ZK813.5 protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
 Frame = +3

Query: 303 NQHWTEDKEVYC--SSHVPKIG--PGHLDNSSVGIRSAL 407
           N  WT+ KEV C  S   P IG  PG+ DNS V   S++
Sbjct: 315 NDVWTKVKEVMCCRSYDPPTIGHMPGYRDNSDVSPASSV 353


>Z79603-10|CAI79233.1|  224|Caenorhabditis elegans Hypothetical
           protein M163.11 protein.
          Length = 224

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 20/74 (27%), Positives = 37/74 (50%)
 Frame = +1

Query: 373 WTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGATNGEASTRLQQGSYRVIP 552
           +TT Q      STC  ++ + ++ S  +S TA + +   + AT+ + S+     S     
Sbjct: 23  YTTAQKTQYCASTC--SLCSDSSDSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSSSAS 80

Query: 553 LTTSTGDSTPAPST 594
            +TS+ D+T A S+
Sbjct: 81  -STSSSDTTTADSS 93


>Z81458-4|CAB03824.1|  623|Caenorhabditis elegans Hypothetical
           protein C03E10.5 protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 322 TKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSG 495
           T   T+  T ++S   T +TP   SEA ST    ITT++  +E+ + T       R G
Sbjct: 177 TTMVTSTPTTEKSSTTTTSTP--TSEATSTTTAMITTTSGTTENPTTTDCPTKVCRYG 232


>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
            protein H02F09.3 protein.
          Length = 1275

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = +1

Query: 367  ATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGATNG---EASTRLQQGS 537
            +T +T   ++E+  T P  ++ ST  +     T        S  + G   EA + +   S
Sbjct: 997  STESTVSGSTESTPTVPSTVSGSTGSTVTGESTVSGSTASTSSGSTGSSTEAGSTVSGSS 1056

Query: 538  YRVIPLTTSTGDSTPAPST 594
               +  T+STG ST   ST
Sbjct: 1057 ASTV--TSSTGSSTSGEST 1073


>AF023454-1|AAB82794.1|  707|Caenorhabditis elegans protein
           phosphatase with EF-hands protein.
          Length = 707

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +1

Query: 394 SEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGATNGEASTRLQQGSYRVIPLTTSTGD 573
           S  L    +A TT+T+ S+  +    +QN   S     E+S+  +Q S +    + S  +
Sbjct: 13  STELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKN 72

Query: 574 STPAP 588
            +P+P
Sbjct: 73  RSPSP 77


>AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 85 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 219 FEGLHLLS*WMFKCAVCGTKLTLKTYY 299
           F+G +LL  W+F CA CG  +    Y+
Sbjct: 123 FDGGYLLC-WVFGCAACGISMVTVKYF 148


>AF003389-11|AAC71139.2|  707|Caenorhabditis elegans Phosphatase
           with ef hands protein1, isoform a protein.
          Length = 707

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +1

Query: 394 SEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGATNGEASTRLQQGSYRVIPLTTSTGD 573
           S  L    +A TT+T+ S+  +    +QN   S     E+S+  +Q S +    + S  +
Sbjct: 13  STELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKN 72

Query: 574 STPAP 588
            +P+P
Sbjct: 73  RSPSP 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,665,820
Number of Sequences: 27780
Number of extensions: 313410
Number of successful extensions: 964
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)