Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30997.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   4.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.9  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   7.9  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   7.9  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 315 TNLKTWVIQTRRSLKKK 365
           T + TW    RR LKK+
Sbjct: 129 TQVSTWFANARRRLKKE 145


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 504 TCPRLANNKALCGFNXMAAVYRL 436
           TC  L+ N  +CG+   A ++ L
Sbjct: 39  TCLNLSINYCICGYIFSAILFSL 61


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 70  KDFNWSNCSALYG 32
           KDF    C+ALYG
Sbjct: 93  KDFQLRLCAALYG 105


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 70  KDFNWSNCSALYG 32
           KDF    C+ALYG
Sbjct: 93  KDFQLRLCAALYG 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,258
Number of Sequences: 336
Number of extensions: 2223
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)