Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30995.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.2  
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    23   5.0  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   8.8  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.8  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 486 IPLPPKIDPTVTMMQVEE 539
           IP PPK  PTVTMM +++
Sbjct: 754 IPPPPK-PPTVTMMDMQQ 770


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -1

Query: 431 SGCDGVL*IDNKLCKLLHVNYVFW 360
           SGCD  L     +C +  + + +W
Sbjct: 50  SGCDASLRCSGDVCGMFAITWAYW 73


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 491 PASENRSNGHHDAGRGE 541
           P S N +NG   AGRGE
Sbjct: 169 PNSLNAANGQSVAGRGE 185


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -2

Query: 79  YHLSLCA-YHSLNGQAFLIFIPTKRLI 2
           Y  + C  YH +NG    +  P+KRL+
Sbjct: 139 YLCNACGLYHKMNGMNRPLIKPSKRLV 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,209
Number of Sequences: 2352
Number of extensions: 10213
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)