Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30995.Seq
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 195 7e-50
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 195 7e-50
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 195 7e-50
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 195 7e-50
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 45 2e-04
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 45 2e-04
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 45 2e-04
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 45 2e-04
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 45 2e-04
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 195 bits (476), Expect = 7e-50
Identities = 91/98 (92%), Positives = 93/98 (94%)
Frame = +3
Query: 249 VGPPALWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAP 428
+ PPALWDLAADKQTLQ+EQPLQVARCTKIINADS DPKYIINVKQFAKFVVDL D VAP
Sbjct: 72 LAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAP 131
Query: 429 TDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 542
TDIEEGM VGVDRNKYQIHIPLPPKIDPTVTMMQVEEK
Sbjct: 132 TDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Score = 84.6 bits (200), Expect = 2e-16
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = +1
Query: 34 MPDHLGNDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRV 213
MPD+LG D R +LDEGDIALLK+YGQ Y++ IK+VE+ IQ ++K++
Sbjct: 1 MPDYLGADQRKTKEDEKDDKPIR-ALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKI 59
Query: 214 NELTGIKESDTGLA 255
NELTGIKESDTGLA
Sbjct: 60 NELTGIKESDTGLA 73
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 195 bits (476), Expect = 7e-50
Identities = 91/98 (92%), Positives = 93/98 (94%)
Frame = +3
Query: 249 VGPPALWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAP 428
+ PPALWDLAADKQTLQ+EQPLQVARCTKIINADS DPKYIINVKQFAKFVVDL D VAP
Sbjct: 72 LAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAP 131
Query: 429 TDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 542
TDIEEGM VGVDRNKYQIHIPLPPKIDPTVTMMQVEEK
Sbjct: 132 TDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Score = 84.6 bits (200), Expect = 2e-16
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = +1
Query: 34 MPDHLGNDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRV 213
MPD+LG D R +LDEGDIALLK+YGQ Y++ IK+VE+ IQ ++K++
Sbjct: 1 MPDYLGADQRKTKEDEKDDKPIR-ALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKI 59
Query: 214 NELTGIKESDTGLA 255
NELTGIKESDTGLA
Sbjct: 60 NELTGIKESDTGLA 73
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 195 bits (476), Expect = 7e-50
Identities = 91/98 (92%), Positives = 93/98 (94%)
Frame = +3
Query: 249 VGPPALWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAP 428
+ PPALWDLAADKQTLQ+EQPLQVARCTKIINADS DPKYIINVKQFAKFVVDL D VAP
Sbjct: 48 LAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAP 107
Query: 429 TDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 542
TDIEEGM VGVDRNKYQIHIPLPPKIDPTVTMMQVEEK
Sbjct: 108 TDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 145
Score = 78.2 bits (184), Expect = 2e-14
Identities = 35/49 (71%), Positives = 44/49 (89%)
Frame = +1
Query: 109 LDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRVNELTGIKESDTGLA 255
LDEGDIALLK+YGQ Y++ IK+VE+ IQ ++K++NELTGIKESDTGLA
Sbjct: 1 LDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLA 49
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 195 bits (476), Expect = 7e-50
Identities = 91/98 (92%), Positives = 93/98 (94%)
Frame = +3
Query: 249 VGPPALWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAP 428
+ PPALWDLAADKQTLQ+EQPLQVARCTKIINADS DPKYIINVKQFAKFVVDL D VAP
Sbjct: 72 LAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAP 131
Query: 429 TDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 542
TDIEEGM VGVDRNKYQIHIPLPPKIDPTVTMMQVEEK
Sbjct: 132 TDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Score = 84.6 bits (200), Expect = 2e-16
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = +1
Query: 34 MPDHLGNDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRV 213
MPD+LG D R +LDEGDIALLK+YGQ Y++ IK+VE+ IQ ++K++
Sbjct: 1 MPDYLGADQRKTKEVEKDDKPIR-ALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKI 59
Query: 214 NELTGIKESDTGLA 255
NELTGIKESDTGLA
Sbjct: 60 NELTGIKESDTGLA 73
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 363 KYIINVKQFAKFVVDLQDSVAPTDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEE 539
K ++ V KFVVD+ ++ D+ V + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 363 KYIINVKQFAKFVVDLQDSVAPTDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEE 539
K ++ V KFVVD+ ++ D+ V + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 363 KYIINVKQFAKFVVDLQDSVAPTDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEE 539
K ++ V KFVVD+ ++ D+ V + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 363 KYIINVKQFAKFVVDLQDSVAPTDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEE 539
K ++ V KFVVD+ ++ D+ V + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 363 KYIINVKQFAKFVVDLQDSVAPTDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEE 539
K ++ V KFVVD+ ++ D+ V + + Y +H LP K+DP V++M VE+
Sbjct: 80 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,281,237
Number of Sequences: 237096
Number of extensions: 1378145
Number of successful extensions: 4884
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4884
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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