Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30995.Seq
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical pr...   182   2e-46
Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical pr...    45   4e-05
AF099922-3|AAK21407.2|  411|Caenorhabditis elegans Hypothetical ...    42   2e-04
AF099922-2|AAM48537.1|  432|Caenorhabditis elegans Hypothetical ...    42   2e-04
U97008-6|AAB52307.1|  323|Caenorhabditis elegans Serpentine rece...    29   2.9  
U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory recep...    28   5.1  
AL132949-10|CAB61082.1|  721|Caenorhabditis elegans Hypothetical...    28   5.1  
AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical
           protein C52E4.4 protein.
          Length = 435

 Score =  182 bits (442), Expect = 2e-46
 Identities = 82/98 (83%), Positives = 90/98 (91%)
 Frame = +3

Query: 249 VGPPALWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAP 428
           + PPALWD+AADKQ +Q EQPLQVARCTKII +D +DP+Y+INVKQFAKFVVDL DSVAP
Sbjct: 74  LAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAP 133

Query: 429 TDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 542
           TDIEEGM VGVDRNKYQIH+PLP KIDPTVTMMQVEEK
Sbjct: 134 TDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171



 Score = 80.6 bits (190), Expect = 7e-16
 Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = +1

Query: 34  MPDHLGNDMRXXXXXXXXXXXXXX-SLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKR 210
           MPDHLG+DMR               +LDEGDIA+LK YGQG Y + +K ++  I+  +K+
Sbjct: 1   MPDHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKK 60

Query: 211 VNELTGIKESDTGLA 255
           VNEL+G+KESDTGLA
Sbjct: 61  VNELSGVKESDTGLA 75


>Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical
           protein Y49E10.1 protein.
          Length = 416

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = +3

Query: 363 KYIINVKQFAKFVVDLQDSVAPTDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEE 539
           K ++ V    K+VVD+  S+    +  G  V +  + Y +H  LP K+DP V++M VE+
Sbjct: 94  KVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEK 152


>AF099922-3|AAK21407.2|  411|Caenorhabditis elegans Hypothetical
           protein F56F11.4a protein.
          Length = 411

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = +3

Query: 363 KYIINVKQFAKFVVDLQDSVAPTDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEE 539
           K ++      K++VD+  SV  + +  G  V +  + Y IH  LP K+DP V++M VE+
Sbjct: 89  KVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEK 147


>AF099922-2|AAM48537.1|  432|Caenorhabditis elegans Hypothetical
           protein F56F11.4b protein.
          Length = 432

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = +3

Query: 363 KYIINVKQFAKFVVDLQDSVAPTDIEEGMXVGVDRNKYQIHIPLPPKIDPTVTMMQVEE 539
           K ++      K++VD+  SV  + +  G  V +  + Y IH  LP K+DP V++M VE+
Sbjct: 110 KVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEK 168


>U97008-6|AAB52307.1|  323|Caenorhabditis elegans Serpentine
           receptor, class h protein275 protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -2

Query: 412 CKSTTNFANCFTLIMYFGSFESALMIFVHRATCSGC--SFCS 293
           C+S  N   CF +I   G F + +M+++H      C   FCS
Sbjct: 268 CQSANNL--CFIIIAAHGLFSTFIMLYIHSPYREACFRIFCS 307


>U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory receptor
           family protein 5 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -2

Query: 382 FTLIM---YFGSFESALMIFVHRATCSGCSFCSVCLSAARSHK 263
           FTL+M   +  SF   L+       C+ C+FCSV ++ AR H+
Sbjct: 284 FTLMMLNQHLSSFTDFLICMPFILFCT-CAFCSVTIAPARVHE 325


>AL132949-10|CAB61082.1|  721|Caenorhabditis elegans Hypothetical
           protein Y53F4B.12 protein.
          Length = 721

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 91  PALLYHLSLCAYHSLNGQAFLIFIPTKRLI 2
           PA  Y LS+C+  +L+G     F+P  R+I
Sbjct: 304 PAAKYMLSVCSVCALSGGVLASFLPATRVI 333


>AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK380.2 protein.
          Length = 495

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 163 KIIKEVEEGIQTVMKRVNELTGIK 234
           +IIK V+E ++ +MK+  E+ G+K
Sbjct: 113 QIIKNVDEAVKGLMKKDEEIAGLK 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,577,389
Number of Sequences: 27780
Number of extensions: 217550
Number of successful extensions: 696
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)