Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30995.Seq
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    23   2.0  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    23   2.0  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    23   2.0  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    23   2.0  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   2.0  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   2.0  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   2.0  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   2.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.7  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   8.2  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   8.2  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   8.2  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   8.2  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   8.2  

>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+ H PL P+  PT
Sbjct: 158 NAYRFHPPLNPRFGPT 173


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+ H PL P+  PT
Sbjct: 158 NAYRFHPPLNPRFGPT 173


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+ H PL P+  PT
Sbjct: 158 NAYRFHPPLNPRFGPT 173


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+ H PL P+  PT
Sbjct: 158 NAYRFHPPLNPRFGPT 173


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+ H PL P+  PT
Sbjct: 162 NAYRFHPPLNPRFGPT 177


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+ H PL P+  PT
Sbjct: 167 NAYRFHPPLNPRFGPT 182


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+ H PL P+  PT
Sbjct: 167 NAYRFHPPLNPRFGPT 182


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+ H PL P+  PT
Sbjct: 167 NAYRFHPPLNPRFGPT 182


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = -3

Query: 441  LQYQWVRRSLVNRQQTLQTA 382
            +Q Q ++R + N+QQ++QT+
Sbjct: 1061 IQQQQLKRVVTNQQQSIQTS 1080


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 545 QFLLDLHHGDRWIYFRRQGYVNLVFITIH 459
           +++  ++  DRW   RRQ  V     ++H
Sbjct: 11  EYIRQVYGEDRWEEIRRQASVEQPSFSVH 39


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+   PL P+ +PT
Sbjct: 160 NAYRFRPPLNPRFEPT 175


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+   PL P+ +PT
Sbjct: 163 NAYRFRPPLNPRFEPT 178


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+   PL P+ +PT
Sbjct: 163 NAYRFRPPLNPRFEPT 178


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+   PL P+ +PT
Sbjct: 163 NAYRFRPPLNPRFEPT 178


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 468 NKYQIHIPLPPKIDPT 515
           N Y+   PL P+ +PT
Sbjct: 163 NAYRFRPPLNPRFEPT 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,501
Number of Sequences: 438
Number of extensions: 2740
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)