Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30990.Seq
(399 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p pro... 122 2e-28
AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p pro... 122 2e-28
AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC... 122 2e-28
BT022800-1|AAY55216.1| 323|Drosophila melanogaster IP13716p pro... 29 1.7
BT022769-1|AAY55185.1| 538|Drosophila melanogaster IP13916p pro... 29 1.7
AE014134-571|AAF51133.1| 528|Drosophila melanogaster CG3347-PA ... 29 1.7
AY060597-1|AAL28145.1| 664|Drosophila melanogaster GH01406p pro... 28 4.0
AE014134-1719|ABC65887.1| 664|Drosophila melanogaster CG5899-PB... 28 4.0
AE014134-1718|ABC65886.1| 831|Drosophila melanogaster CG5899-PC... 28 4.0
AE014134-1717|AAF52824.1| 844|Drosophila melanogaster CG5899-PA... 28 4.0
AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer pr... 27 7.0
AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA... 27 7.0
AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD... 27 9.2
AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE... 27 9.2
>AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p
protein.
Length = 208
Score = 122 bits (294), Expect = 2e-28
Identities = 56/75 (74%), Positives = 63/75 (84%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
+TGNF+W SE RK
Sbjct: 61 ETGNFAWASEGVARK 75
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 395
+TRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLG
Sbjct: 75 KTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLG 122
>AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p
protein.
Length = 208
Score = 122 bits (294), Expect = 2e-28
Identities = 56/75 (74%), Positives = 63/75 (84%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
+TGNF+W SE RK
Sbjct: 61 ETGNFAWASEGVARK 75
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 395
+TRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLG
Sbjct: 75 KTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLG 122
>AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC
protein.
Length = 208
Score = 122 bits (294), Expect = 2e-28
Identities = 56/75 (74%), Positives = 63/75 (84%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
+TGNF+W SE RK
Sbjct: 61 ETGNFAWASEGVARK 75
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 395
+TRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLG
Sbjct: 75 KTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLG 122
>BT022800-1|AAY55216.1| 323|Drosophila melanogaster IP13716p
protein.
Length = 323
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 365 PLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDT 258
P+PE SC Y C I+RCI+ N++ T
Sbjct: 261 PVPETSCQKYRKLSFTDENCEKIKIIRCIVSNMSPT 296
>BT022769-1|AAY55185.1| 538|Drosophila melanogaster IP13916p
protein.
Length = 538
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 365 PLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDT 258
P+PE SC Y C I+RCI+ N++ T
Sbjct: 476 PVPETSCQKYRKLSFTDENCEKIKIIRCIVSNMSPT 511
>AE014134-571|AAF51133.1| 528|Drosophila melanogaster CG3347-PA
protein.
Length = 528
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 365 PLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDT 258
P+PE SC Y C I+RCI+ N++ T
Sbjct: 466 PVPETSCQKYRKLSFTDENCEKIKIIRCIVSNMSPT 501
>AY060597-1|AAL28145.1| 664|Drosophila melanogaster GH01406p
protein.
Length = 664
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 240 MFNSQTRIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQW 365
M + ++ + AS EL KTL K A+ ++D PF W
Sbjct: 180 MTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDW 222
>AE014134-1719|ABC65887.1| 664|Drosophila melanogaster CG5899-PB,
isoform B protein.
Length = 664
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 240 MFNSQTRIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQW 365
M + ++ + AS EL KTL K A+ ++D PF W
Sbjct: 180 MTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDW 222
>AE014134-1718|ABC65886.1| 831|Drosophila melanogaster CG5899-PC,
isoform C protein.
Length = 831
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 240 MFNSQTRIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQW 365
M + ++ + AS EL KTL K A+ ++D PF W
Sbjct: 167 MTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDW 209
>AE014134-1717|AAF52824.1| 844|Drosophila melanogaster CG5899-PA,
isoform A protein.
Length = 844
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 240 MFNSQTRIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQW 365
M + ++ + AS EL KTL K A+ ++D PF W
Sbjct: 180 MTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDW 222
>AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer
protein.
Length = 1854
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 16 FDPTKM--GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNT 189
+DP M G+SRDH+H+ +R R +R ++ P+R H+ S +
Sbjct: 188 YDPEDMEYGMSRDHYHQHAEEQEQREMRRLRRS---THSTDHSPPPPRRSHT-HSESNDR 243
Query: 190 KYRALRLDTGNFSW 231
+Y D G+ W
Sbjct: 244 EYIRCSRDKGSRDW 257
>AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA
protein.
Length = 1854
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 16 FDPTKM--GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNT 189
+DP M G+SRDH+H+ +R R +R ++ P+R H+ S +
Sbjct: 188 YDPEDMEYGMSRDHYHQHAEEQEQREMRRLRRS---THSTDHSPPPPRRSHT-HSESNDR 243
Query: 190 KYRALRLDTGNFSW 231
+Y D G+ W
Sbjct: 244 EYIRCSRDKGSRDW 257
>AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD,
isoform D protein.
Length = 983
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 92 YARRGSMS*GVPLQTPGSALSESTPFVH 175
Y RGS+S P +TPGS +TP H
Sbjct: 323 YGSRGSLS-STPARTPGSRSGNATPGGH 349
>AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE,
isoform E protein.
Length = 898
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 92 YARRGSMS*GVPLQTPGSALSESTPFVH 175
Y RGS+S P +TPGS +TP H
Sbjct: 238 YGSRGSLS-STPARTPGSRSGNATPGGH 264
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,950,212
Number of Sequences: 53049
Number of extensions: 471123
Number of successful extensions: 1352
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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