Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30989.Seq
         (449 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1314 - 25721137-25721538                                         43   1e-04
01_07_0382 + 43188478-43190919                                         29   1.3  
05_04_0319 + 20171486-20171800,20171882-20171956,20172160-201721...    28   3.0  
11_01_0185 + 1455635-1455817,1455997-1456051,1456415-1456611,145...    27   5.3  
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348...    27   5.3  
01_06_0077 + 26215954-26216224,26216355-26216579,26217099-262172...    27   7.0  

>07_03_1314 - 25721137-25721538
          Length = 133

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 256 TGYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADS 381
           TGYPL +       KE + NPEF+  ++PK+DW  L  A  +
Sbjct: 18  TGYPLKLQVVKWSTKEAEPNPEFLRGMLPKIDWPALVAATQA 59


>01_07_0382 + 43188478-43190919
          Length = 813

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -3

Query: 405 LADHHCGRAISGH 367
           LADHHCGRAI  H
Sbjct: 138 LADHHCGRAIHRH 150


>05_04_0319 +
           20171486-20171800,20171882-20171956,20172160-20172195,
           20172302-20172413,20173082-20173152,20173287-20173417,
           20173718-20173783,20174003-20174103,20174311-20174370,
           20174463-20174496,20174852-20174950,20175019-20175078,
           20175700-20175874,20175900-20175950,20176603-20176632
          Length = 471

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 448 LQKLSVPSYLFSKDLGRPSLWPS 380
           L ++ VP +  S  +G PSLWPS
Sbjct: 257 LAEIDVPGHALSWGVGYPSLWPS 279


>11_01_0185 +
           1455635-1455817,1455997-1456051,1456415-1456611,
           1456850-1457206,1457355-1457424,1457527-1457672,
           1457786-1457831,1457910-1457962,1458507-1458651,
           1459268-1459386,1459494-1459565,1459872-1459975,
           1460117-1460173,1460260-1460452,1460535-1460678,
           1460825-1460927,1461444-1461592,1462674-1462728,
           1464037-1464227,1464580-1464701,1464831-1464978,
           1465354-1465423,1465499-1465644,1466097-1466247,
           1466614-1466732,1466807-1466848,1466849-1466961,
           1467496-1467552,1467642-1467834,1468040-1468183,
           1468567-1468665
          Length = 1280

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 377 SAATHNTSQSSFGITRLINSGLKSTSLTLMSVALIAR 267
           SA T   S++SF   ++IN G    SLT+ +  L AR
Sbjct: 584 SAITWQDSENSFLRVKIINFGSDPVSLTISATGLQAR 620


>01_06_1626 -
           38734128-38734160,38734386-38734560,38734819-38734878,
           38734961-38735059,38735191-38735224,38735315-38735374,
           38735596-38735696,38735949-38736014,38736695-38736825,
           38736946-38737038,38737273-38737338,38737459-38737494,
           38738308-38738382,38738475-38738792
          Length = 448

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 448 LQKLSVPSYLFSKDLGRPSLWPS 380
           + ++ VP +  S  +G PSLWPS
Sbjct: 250 MAEIDVPGHALSWGVGYPSLWPS 272


>01_06_0077 +
           26215954-26216224,26216355-26216579,26217099-26217247,
           26217353-26217629,26217956-26218236
          Length = 400

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 427 SYLFSKDLGRPSLWPSY 377
           ++L+  D  RPSLWP Y
Sbjct: 52  AFLYGNDSRRPSLWPPY 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,786,588
Number of Sequences: 37544
Number of extensions: 160671
Number of successful extensions: 395
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)