Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30975.Seq
(598 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 127 1e-30
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 83 3e-17
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 83 3e-17
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 81 2e-16
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 75 1e-14
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 74 1e-14
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 63 3e-11
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 62 5e-11
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 37 0.002
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 2.1
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 27 2.7
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 2.7
SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces p... 26 3.6
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 26 4.8
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 25 6.3
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 127 bits (307), Expect = 1e-30
Identities = 63/89 (70%), Positives = 76/89 (85%)
Frame = +1
Query: 256 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 435
L+VEHPA KVLVELAQ QD+EVGDGTTSVVIIAAELL+ A+ELVK KIHPT+II+GYRLA
Sbjct: 70 LDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLA 129
Query: 436 CKEAVKYIQDNLTVTVESLGRPSLTTQPK 522
+EAVK++ D L+ +V+SLG+ SL K
Sbjct: 130 IREAVKFMTDVLSCSVDSLGKESLINVAK 158
Score = 83.4 bits (197), Expect = 2e-17
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +2
Query: 77 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 250
L ++G + G+ VR QNV+ N+VKSSLGPVGLDKMLVDDIGDVTVTNDGATIL
Sbjct: 10 LFLSGEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 67
Score = 33.9 bits (74), Expect = 0.018
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 524 NLSSKLIGADADFFSEMVVDAAQAI 598
++SSK+IG D+DFFS M VDA ++
Sbjct: 160 SMSSKIIGNDSDFFSTMAVDAMLSV 184
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 83.0 bits (196), Expect = 3e-17
Identities = 39/79 (49%), Positives = 58/79 (73%)
Frame = +1
Query: 247 IKKLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
++++EV HPAAK ++ELA+ QDEEVGDGTTSV+I+A E+L A L+ KIHP +I +
Sbjct: 65 LREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSF 124
Query: 427 RLACKEAVKYIQDNLTVTV 483
+ A ++A+ I D +T+ V
Sbjct: 125 KQALEDALSII-DEITLPV 142
Score = 45.6 bits (103), Expect = 6e-06
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 77 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
++ G R G + N+ +++++ LGP + KML+D +G V +TNDG IL+
Sbjct: 8 MNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILR 66
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 83.0 bits (196), Expect = 3e-17
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +1
Query: 247 IKKLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+K + +++ AAKVLV ++++QD+EVGDGTTSV + AAELL+ A+ +V KIHP II GY
Sbjct: 67 LKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGY 126
Query: 427 RLACKEAV 450
R+A K A+
Sbjct: 127 RIATKTAI 134
Score = 52.0 bits (119), Expect = 6e-08
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 86 AGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDI-GDVTVTNDGATILKS 256
+G + G+ R + + ++VKS+LGP G+DK+L + GD+ VTNDGATILKS
Sbjct: 12 SGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKS 69
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 80.6 bits (190), Expect = 2e-16
Identities = 35/71 (49%), Positives = 52/71 (73%)
Frame = +1
Query: 247 IKKLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+ ++EVEH AK+LV+L++ QD+E+GDGTT VV++A LL+ A+ L+ IHP I GY
Sbjct: 80 LDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGY 139
Query: 427 RLACKEAVKYI 459
AC+ AVK++
Sbjct: 140 EKACQVAVKHL 150
Score = 52.8 bits (121), Expect = 4e-08
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +2
Query: 107 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 250
D V++ +++ NIV++SLGP GLDK+L+ G++TVTNDGATIL
Sbjct: 34 DAVKS-HILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATIL 80
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 74.5 bits (175), Expect = 1e-14
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = +1
Query: 247 IKKLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+K L V HPAAK+LV+L+ QD E GDGTTSVVI+A +L A++L+K IHPT I +
Sbjct: 65 LKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESF 124
Query: 427 RLACKEAVKYIQDNLTVTVESLGRPSL 507
+ A V +++N + +E R SL
Sbjct: 125 QRAAGFTVDCMKEN-ALAIELSDRESL 150
Score = 51.2 bits (117), Expect = 1e-07
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +2
Query: 113 VRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
VR N+M + +++SLGP G+DKM+ G+V +TNDGATILK
Sbjct: 20 VRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILK 66
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 74.1 bits (174), Expect = 1e-14
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 247 IKKLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+K L++ HPAAK LV++A+ QD EVGDGTTSVV+ A ELL+ A V+ + II GY
Sbjct: 70 MKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGY 129
Query: 427 RLACKEAVKYIQD 465
R A + AV I++
Sbjct: 130 RKAAQLAVNKIKE 142
Score = 49.6 bits (113), Expect = 3e-07
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2
Query: 125 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
N+ + ++++LGP+G DK++VDD G+V ++NDGATI+K
Sbjct: 29 NINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMK 71
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +2
Query: 527 LSSKLIGADADFFSEMVVDA 586
++SKLI +++ FF++MVVDA
Sbjct: 167 MNSKLIRSNSTFFTKMVVDA 186
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 63.3 bits (147), Expect = 3e-11
Identities = 27/82 (32%), Positives = 49/82 (59%)
Frame = +1
Query: 247 IKKLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
I++LEV HPAAK++V+ Q Q+ E+GD VV+ ELL A+ +++ + P I GY
Sbjct: 72 IRELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGY 131
Query: 427 RLACKEAVKYIQDNLTVTVESL 492
+A ++ +++ +E++
Sbjct: 132 EMALSHTMEVLEEICADKIETV 153
Score = 33.9 bits (74), Expect = 0.018
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2
Query: 155 IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
I ++SLGP G +K++V+ + +TND ATI++
Sbjct: 41 ITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIR 73
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 62.5 bits (145), Expect = 5e-11
Identities = 25/71 (35%), Positives = 46/71 (64%)
Frame = +1
Query: 247 IKKLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+ ++++++P A + + A QD+ GDGTTSV ++ ELLK A+ ++ +HP+ I G+
Sbjct: 62 LTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGF 121
Query: 427 RLACKEAVKYI 459
LA EA+ ++
Sbjct: 122 NLAKNEALTFL 132
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 125 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 250
N+ +++KS+LGP G KMLVD G + +T DG +L
Sbjct: 21 NISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLL 62
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = +1
Query: 253 KLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRL 432
K + E+ A+++ ++A +E GDGTT+ ++ + V +P + G +L
Sbjct: 94 KDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQL 153
Query: 433 ACKEAVKYIQDN 468
A V+++Q N
Sbjct: 154 AVDNVVEFLQAN 165
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 158 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKS 256
V +LGP G + ++ G +T DG T+ +S
Sbjct: 58 VSVTLGPKGRNVLIDQPFGSPKITKDGVTVARS 90
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 334 TSVVIIAAELLKNADELVKTKIHPTSIISGY 426
T++++++ LL E + TK+HP+ +S Y
Sbjct: 302 TNLIVVSVALLHQWAEELSTKVHPSKKLSVY 332
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 26.6 bits (56), Expect = 2.7
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 165 APLGQLVWIRCWLTILGM 218
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 26.6 bits (56), Expect = 2.7
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 165 APLGQLVWIRCWLTILGM 218
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 232
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 391 TKIHPTSIISGYRLACKEAVKYIQDNLTVTVESLGRPSLTTQ 516
T +HP I+ +R ++ V Y+Q +L+ + R L+ Q
Sbjct: 82 THVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQ 123
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 4.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 168 PLGQLVWIRCWLTILGM 218
PLG+++WI W +LG+
Sbjct: 145 PLGKMMWIFAWRWLLGL 161
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 298 AQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLT 474
A L DE G V+++A + K LV I+P ++ A +K DN+T
Sbjct: 192 ASLLDEGTAAGEAMVMLMANDKKKRKTFLVDKNIYPNTLSVLRTRASGFGIKIELDNIT 250
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,351,787
Number of Sequences: 5004
Number of extensions: 44339
Number of successful extensions: 141
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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