Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30973.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          25   1.9  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          25   1.9  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          25   1.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.2  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   5.7  

>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 248 SLKKYVLIFININFTT 295
           SL++Y+L+F+NI F T
Sbjct: 3   SLRRYILLFLNICFYT 18


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 248 SLKKYVLIFININFTT 295
           SL++Y+L+F+NI F T
Sbjct: 3   SLRRYILLFLNICFYT 18


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 248 SLKKYVLIFININFTT 295
           SL++Y+L+F+NI F T
Sbjct: 3   SLRRYILLFLNICFYT 18


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 195 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEI 34
           E  DF+  ++  E  I  + + + KT+T   K  S+ A  EKI  D+ +   E+
Sbjct: 696 ELADFRAELKQTEANINSIVSEMQKTETKQGK--SKDA-FEKIQADIRLMKDEL 746


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -2

Query: 153 RIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESRNENVLDL 1
           +I    + +L    DL     RT  I     +L IE     ++RN  VLDL
Sbjct: 128 KIAKFSSTVLAGLGDLRNFTLRTHNIAWPELNLEIEADAFGQTRNLEVLDL 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,077
Number of Sequences: 2352
Number of extensions: 8095
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)