Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30972.Seq
         (597 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    56   9e-10
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   3.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   3.2  
AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450 pr...    23   5.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.5  

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 56.0 bits (129), Expect = 9e-10
 Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
 Frame = -1

Query: 597 VCHKTRALXDAMAADCAPPEATLRRRRDG---ANSVLMQMQADLLGIPVIRPLMMESTAL 427
           VC +TR + +AM  DC      L    DG   +NS+LMQ+QADL GIPV+R  + E  AL
Sbjct: 399 VCFQTRDIIEAMKKDCGINLNKLHT--DGIMASNSLLMQLQADLSGIPVLRTEVHEPAAL 456

Query: 426 GAAIVAGRAMRVWPTTIPS---------PPADTFLPALTNXXXXXXXXXXXEALNKCMGW 274
           G A+ A +A  V    + +            +TFLP  T             A+ + +GW
Sbjct: 457 GTAMAAAQANGVDLYKLEAEIRGYAGVQSHHETFLPTTTEEERNARYTKWKMAVQRSLGW 516

Query: 273 TDTKNELSTQKNQIELL 223
             +K   +    +  LL
Sbjct: 517 AVSKKSEAMTDERYSLL 533


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +3

Query: 354 MYRPVGWVLSWATHALRDLRQWPPPGLYFPS*GDE*LVYPVNQPASASELS 506
           +Y P    + W  H +RDLR W    +Y  S G        NQP SASE++
Sbjct: 556 LYMPNRERVLWPAHNVRDLRLWTE--VYLGSWGGH------NQP-SASEVA 597


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +3

Query: 354 MYRPVGWVLSWATHALRDLRQWPPPGLYFPS*GDE*LVYPVNQPASASELS 506
           +Y P    + W  H +RDLR W    +Y  S G        NQP SASE++
Sbjct: 556 LYMPNRERVLWPAHNVRDLRLWTE--VYLGSWGGH------NQP-SASEVA 597


>AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 406 SRNACVAHDNTQPTGRYIP 350
           +R AC++ DN Q   R++P
Sbjct: 17  TRVACLSEDNFQQADRFLP 35


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 393 VWPTTIPSPPADTFLPAL 340
           V+P+ +P  P D++ PAL
Sbjct: 302 VFPSVVPLVPLDSYHPAL 319


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 17/61 (27%), Positives = 22/61 (36%)
 Frame = -3

Query: 538 GNSSPTEGWRELSSDADAG*FTGYTSHSSPHDGKYSPGGGHCRRSRNACVAHDNTQPTGR 359
           G     EGW   + D  A   T       P  G+   G G C      C   ++ + TGR
Sbjct: 614 GQCECREGWTGPACDCRASNETCMP----PGGGELCSGHGTCECGTCRCTVTEDGRYTGR 669

Query: 358 Y 356
           Y
Sbjct: 670 Y 670


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,621
Number of Sequences: 2352
Number of extensions: 13800
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)