Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30971.Seq
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4C87 Cluster: PREDICTED: similar to GA18613-PA... 64 2e-09
UniRef50_Q17L26 Cluster: Protoheme ix farnesyltransferase; n=4; ... 61 2e-08
UniRef50_Q9VKZ1 Cluster: CG5037-PA; n=2; Endopterygota|Rep: CG50... 59 7e-08
UniRef50_A7RJI6 Cluster: Predicted protein; n=1; Nematostella ve... 49 1e-04
UniRef50_Q12887 Cluster: Protoheme IX farnesyltransferase, mitoc... 49 1e-04
UniRef50_UPI0000E4A479 Cluster: PREDICTED: hypothetical protein,... 46 9e-04
UniRef50_Q4RYF0 Cluster: Chromosome 2 SCAF14976, whole genome sh... 42 0.015
UniRef50_Q4P2H1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.025
UniRef50_A5DH49 Cluster: Putative uncharacterized protein; n=1; ... 40 0.044
UniRef50_Q9U2G3 Cluster: Putative uncharacterized protein; n=2; ... 38 0.14
UniRef50_UPI0000F1E001 Cluster: PREDICTED: similar to LOC553384 ... 38 0.18
UniRef50_Q5K8R7 Cluster: Protoheme IX farnesyltransferase, putat... 38 0.18
UniRef50_A7EFL4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q6C0L2 Cluster: Protoheme IX farnesyltransferase, mitoc... 36 0.72
UniRef50_Q9Y7Y4 Cluster: Protoheme IX farnesyltransferase, mitoc... 36 0.72
UniRef50_P0C150 Cluster: Protoheme IX farnesyltransferase, mitoc... 36 0.72
UniRef50_Q7R9A5 Cluster: Erythrocyte membrane-associated antigen... 34 2.2
UniRef50_Q2GQA6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q6BKW6 Cluster: Protoheme IX farnesyltransferase, mitoc... 34 2.9
UniRef50_P21592 Cluster: Protoheme IX farnesyltransferase, mitoc... 33 6.7
>UniRef50_UPI00015B4C87 Cluster: PREDICTED: similar to GA18613-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA18613-PA - Nasonia vitripennis
Length = 420
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +2
Query: 395 QYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCLWG 517
+YCLMLSK RLTSLVV+T+M GYA+APAPF L TF C G
Sbjct: 107 KYCLMLSKIRLTSLVVITAMGGYAIAPAPFDLVTFLACSVG 147
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 487 TYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
T+ C VGTGLVSAAAN++NQ EVP+D M+RTK
Sbjct: 140 TFLAC--SVGTGLVSAAANAVNQSMEVPYDAQMARTK 174
>UniRef50_Q17L26 Cluster: Protoheme ix farnesyltransferase; n=4;
Endopterygota|Rep: Protoheme ix farnesyltransferase -
Aedes aegypti (Yellowfever mosquito)
Length = 487
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2
Query: 404 LMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCLWG 517
LMLSK RLTSLVV+T+MAGYA+APAPF+L+TF C G
Sbjct: 132 LMLSKIRLTSLVVMTTMAGYAMAPAPFELSTFLLCAVG 169
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +1
Query: 481 VSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
+ST+ LC VGT LVS AANSINQ E FD M RT+
Sbjct: 160 LSTFLLCA--VGTTLVSGAANSINQVIETSFDAQMPRTR 196
>UniRef50_Q9VKZ1 Cluster: CG5037-PA; n=2; Endopterygota|Rep:
CG5037-PA - Drosophila melanogaster (Fruit fly)
Length = 391
Score = 59.3 bits (137), Expect = 7e-08
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +1
Query: 484 STYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
+T+ +C L GTGLVSAAAN+INQYHEVPFD MSRTK
Sbjct: 106 TTFAMCTL--GTGLVSAAANAINQYHEVPFDSQMSRTK 141
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2
Query: 410 LSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCLWG 517
LSK RLTSLVV+T+M GYA+APA F TTFA C G
Sbjct: 79 LSKFRLTSLVVITTMGGYAMAPAAFDPTTFAMCTLG 114
>UniRef50_A7RJI6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 402
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2
Query: 398 YCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCLWG 517
Y LSK RL+ +VVLT+MAGYALAPAP L TF + G
Sbjct: 109 YYARLSKIRLSGMVVLTAMAGYALAPAPMYLDTFLWASLG 148
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 511 VGTGLVSAAANSINQYHEVPFDGPMSRTK 597
+GTGL SAAANS NQ+ EVPFD M+RTK
Sbjct: 147 LGTGLCSAAANSFNQWLEVPFDSQMNRTK 175
>UniRef50_Q12887 Cluster: Protoheme IX farnesyltransferase,
mitochondrial precursor; n=28; Euteleostomi|Rep:
Protoheme IX farnesyltransferase, mitochondrial
precursor - Homo sapiens (Human)
Length = 443
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +1
Query: 511 VGTGLVSAAANSINQYHEVPFDGPMSRTK 597
VGTGL S AANSINQ+ EVPFD M+RTK
Sbjct: 194 VGTGLASCAANSINQFFEVPFDSNMNRTK 222
Score = 38.3 bits (85), Expect = 0.14
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 410 LSKSRLTSLVVLTSMAGYALAPAPFQLTTF 499
LSK +LT+LVV T+ AG+ALAP PF F
Sbjct: 160 LSKIKLTALVVSTTAAGFALAPGPFDWPCF 189
>UniRef50_UPI0000E4A479 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 440
Score = 45.6 bits (103), Expect = 9e-04
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +2
Query: 404 LMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFA 502
+ LSKSRLTSLVV++++AGY +AP F +TT A
Sbjct: 148 MQLSKSRLTSLVVISALAGYGMAPGVFDITTCA 180
Score = 39.1 bits (87), Expect = 0.078
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +1
Query: 502 ILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
++ +GT L S +AN++NQ+ EVP+D M+RT+
Sbjct: 181 LMGLGTFLTSCSANTVNQFCEVPYDSQMARTR 212
>UniRef50_Q4RYF0 Cluster: Chromosome 2 SCAF14976, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF14976, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 508
Score = 41.5 bits (93), Expect = 0.015
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 410 LSKSRLTSLVVLTSMAGYALAPAPFQLTTF 499
LSK +LT+LVV T+ AGYA+AP PF TF
Sbjct: 34 LSKIKLTALVVTTAAAGYAMAPVPFDPLTF 63
>UniRef50_Q4P2H1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1527
Score = 40.7 bits (91), Expect = 0.025
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2
Query: 410 LSKSRLTSLVVLTSMAGYALAPA 478
LSKSRLT LVVLT MAGYAL PA
Sbjct: 1219 LSKSRLTFLVVLTGMAGYALCPA 1241
Score = 37.1 bits (82), Expect = 0.31
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +1
Query: 478 PVSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
PV+T L L G L SAAAN++NQ E P+D M RT+
Sbjct: 1250 PVTT--LLALTAGMTLCSAAANALNQLVESPYDAQMQRTR 1287
>UniRef50_A5DH49 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 448
Score = 39.9 bits (89), Expect = 0.044
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +1
Query: 469 STCPVSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRT 594
S VS LC+L +GT L S AAN+IN E FD M RT
Sbjct: 154 SPLSVSVPELCLLTLGTALCSGAANAINMAREPDFDRQMPRT 195
>UniRef50_Q9U2G3 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 397
Score = 38.3 bits (85), Expect = 0.14
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +1
Query: 478 PVSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
PV+ L VGT L+S+AAN+ NQ E P+D M RT+
Sbjct: 118 PVAADSLIAATVGTFLLSSAANACNQLLEAPYDAQMRRTQ 157
>UniRef50_UPI0000F1E001 Cluster: PREDICTED: similar to LOC553384
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
LOC553384 protein - Danio rerio
Length = 324
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 410 LSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCLWG 517
LSK +LT+LVV T+ AG+A+AP PF F G
Sbjct: 221 LSKLKLTALVVTTAAAGFAMAPVPFDPVGFLMASLG 256
>UniRef50_Q5K8R7 Cluster: Protoheme IX farnesyltransferase,
putative; n=2; Filobasidiella neoformans|Rep: Protoheme
IX farnesyltransferase, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 484
Score = 37.9 bits (84), Expect = 0.18
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +1
Query: 469 STCPVSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
S P+S L L VGT L SAAAN+ NQ E P D RT+
Sbjct: 183 SPLPLSIPLLLNLTVGTLLTSAAANTFNQIFESPIDAQTPRTR 225
>UniRef50_A7EFL4 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 512
Score = 37.1 bits (82), Expect = 0.31
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 472 TCPVSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
T +S L L GT L +A+AN++N +E FD MSRT+
Sbjct: 192 TPSLSPLTLLFLTTGTALCAASANTLNMLYEPKFDAQMSRTR 233
>UniRef50_Q6C0L2 Cluster: Protoheme IX farnesyltransferase,
mitochondrial precursor; n=3; Saccharomycetales|Rep:
Protoheme IX farnesyltransferase, mitochondrial
precursor - Yarrowia lipolytica (Candida lipolytica)
Length = 471
Score = 35.9 bits (79), Expect = 0.72
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 410 LSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCLWG 517
L+K RLT LVVL++M+ YAL P LT F G
Sbjct: 165 LTKPRLTVLVVLSAMSSYALTPEAVSLTNLLFLTVG 200
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 481 VSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
VS L L VGT L S +AN+IN E +D M+RT+
Sbjct: 189 VSLTNLLFLTVGTALCSGSANAINMGREPAYDSMMTRTR 227
>UniRef50_Q9Y7Y4 Cluster: Protoheme IX farnesyltransferase,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Protoheme IX farnesyltransferase,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 387
Score = 35.9 bits (79), Expect = 0.72
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 404 LMLSKSRLTSLVVLTSMAGYALAPAP-FQLTTFAFCLWG 517
L L K RLT LVVL++M+ YALAP P T A+ G
Sbjct: 88 LELGKPRLTVLVVLSTMSSYALAPYPGLSFNTLAWLTMG 126
>UniRef50_P0C150 Cluster: Protoheme IX farnesyltransferase,
mitochondrial precursor; n=3; Sordariomycetes|Rep:
Protoheme IX farnesyltransferase, mitochondrial
precursor - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 552
Score = 35.9 bits (79), Expect = 0.72
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +2
Query: 404 LMLSKSRLTSLVVLTSMAGYALAPAPFQLT 493
L LSK RLT LVVL++M YAL P P LT
Sbjct: 208 LALSKPRLTMLVVLSAMVPYALYPVPDFLT 237
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 481 VSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
+S L L GT L SAAAN++N +E D MSRT+
Sbjct: 245 LSPLTLLFLTTGTTLCSAAANALNMIYEPKTDALMSRTR 283
>UniRef50_Q7R9A5 Cluster: Erythrocyte membrane-associated antigen;
n=4; Plasmodium (Vinckeia)|Rep: Erythrocyte
membrane-associated antigen - Plasmodium yoelii yoelii
Length = 759
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 124 RRINLIMSYLKVIHCTLCLKHGYVGVY-SKPVLFKITNNTLFQHLP 258
+R NL + + V+ CT LKH + VY ++ + F++ NN + ++P
Sbjct: 9 KRFNLFLISIVVLICTFGLKHNLIIVYKNEDISFRVLNNDIGTNIP 54
>UniRef50_Q2GQA6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 471
Score = 34.3 bits (75), Expect = 2.2
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2
Query: 404 LMLSKSRLTSLVVLTSMAGYALAPAP 481
L LSK RLT LVVL++M YAL P P
Sbjct: 98 LSLSKPRLTVLVVLSAMVPYALYPVP 123
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 481 VSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRTK 597
+S L L GT L SAAAN++N +E D M+RT+
Sbjct: 141 LSPLTLLFLTTGTTLCSAAANALNMLYEPDTDAKMTRTR 179
>UniRef50_Q6BKW6 Cluster: Protoheme IX farnesyltransferase,
mitochondrial precursor; n=5; Saccharomycetales|Rep:
Protoheme IX farnesyltransferase, mitochondrial
precursor - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 462
Score = 33.9 bits (74), Expect = 2.9
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1
Query: 481 VSTYYLCILPVGTGLVSAAANSINQYHEVPFDGPMSRT 594
VS L L +GT L S AAN+IN E FD M RT
Sbjct: 171 VSLPELLFLTMGTALCSGAANAINMGREPEFDKKMPRT 208
>UniRef50_P21592 Cluster: Protoheme IX farnesyltransferase,
mitochondrial precursor; n=4; Saccharomycetaceae|Rep:
Protoheme IX farnesyltransferase, mitochondrial
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 462
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 338 PRHQSMEGNTII*QEEHTGQYCLMLSKSRLTSLVVLTSMAGYALAPAP 481
P H EG + ++ L L+K RLT LV+L+++ YAL+P P
Sbjct: 128 PSHAISEGLNMKTLKKKVIMPYLQLTKPRLTILVMLSAICSYALSPYP 175
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,655,928
Number of Sequences: 1657284
Number of extensions: 11984043
Number of successful extensions: 26042
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 25172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26038
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -