Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30970.Seq
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 142 6e-34
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 142 6e-34
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 142 6e-34
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 142 6e-34
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 136 7e-32
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 38 0.020
AF061324-1|AAC16058.1| 1549|Homo sapiens sulfonylurea receptor 2... 33 1.0
AF061323-1|AAC16057.1| 1549|Homo sapiens sulfonylurea receptor 2... 33 1.0
AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1). pr... 29 9.5
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 142 bits (345), Expect = 6e-34
Identities = 62/75 (82%), Positives = 67/75 (89%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
D GNFSWGSEC TRK
Sbjct: 61 DVGNFSWGSECCTRK 75
Score = 136 bits (328), Expect = 7e-32
Identities = 66/106 (62%), Positives = 79/106 (74%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGXKKGAXLTEAEE 431
+TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG KKGA LT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 432 AIINKKRSQRQQENTWQGXVLLKLKVSRRAISHKGVCLACVASRPG 569
I+NKKRS++ Q+ + K+ +G LAC+ASRPG
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 142 bits (345), Expect = 6e-34
Identities = 62/75 (82%), Positives = 67/75 (89%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
D GNFSWGSEC TRK
Sbjct: 61 DVGNFSWGSECCTRK 75
Score = 136 bits (328), Expect = 7e-32
Identities = 66/106 (62%), Positives = 79/106 (74%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGXKKGAXLTEAEE 431
+TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG KKGA LT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 432 AIINKKRSQRQQENTWQGXVLLKLKVSRRAISHKGVCLACVASRPG 569
I+NKKRS++ Q+ + K+ +G LAC+ASRPG
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 142 bits (345), Expect = 6e-34
Identities = 62/75 (82%), Positives = 67/75 (89%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
D GNFSWGSEC TRK
Sbjct: 61 DVGNFSWGSECCTRK 75
Score = 136 bits (328), Expect = 7e-32
Identities = 66/106 (62%), Positives = 79/106 (74%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGXKKGAXLTEAEE 431
+TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG KKGA LT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 432 AIINKKRSQRQQENTWQGXVLLKLKVSRRAISHKGVCLACVASRPG 569
I+NKKRS++ Q+ + K+ +G LAC+ASRPG
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 142 bits (345), Expect = 6e-34
Identities = 62/75 (82%), Positives = 67/75 (89%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
D GNFSWGSEC TRK
Sbjct: 61 DVGNFSWGSECCTRK 75
Score = 136 bits (328), Expect = 7e-32
Identities = 66/106 (62%), Positives = 79/106 (74%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGXKKGAXLTEAEE 431
+TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG KKGA LT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 432 AIINKKRSQRQQENTWQGXVLLKLKVSRRAISHKGVCLACVASRPG 569
I+NKKRS++ Q+ + K+ +G LAC+ASRPG
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 136 bits (328), Expect = 7e-32
Identities = 66/106 (62%), Positives = 79/106 (74%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGXKKGAXLTEAEE 431
+TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG KKGA LT EE
Sbjct: 55 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 114
Query: 432 AIINKKRSQRQQENTWQGXVLLKLKVSRRAISHKGVCLACVASRPG 569
I+NKKRS++ Q+ + K+ +G LAC+ASRPG
Sbjct: 115 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 160
Score = 97.9 bits (233), Expect = 2e-20
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTK 192
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG T+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCTR 54
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 38.3 bits (85), Expect = 0.020
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 414 LTEAEEAIINKKRSQRQQENTWQGXVLLKLKVSRRAISHKGVCLACVASRPG 569
LT EE I+NKKRS++ Q+ + K+ +G LAC+ASRPG
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 52
>AF061324-1|AAC16058.1| 1549|Homo sapiens sulfonylurea receptor 2B
protein.
Length = 1549
Score = 32.7 bits (71), Expect = 1.0
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Frame = +1
Query: 37 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-------SVRSRGGNTKY 195
I D W TG P +K+ +P R P R H + R R T+
Sbjct: 614 IGDDSWR----TGESSLPFESCKKHTGVQPKTINRKQPGRYHLDSYEQSTRRLRPAETED 669
Query: 196 RALRLDTGNFSWGSECSTRKPVSLMLCIMHLTM 294
A+++ G FSWGS +T + + + LTM
Sbjct: 670 IAIKVTNGYFSWGSGLATLSNIDIRIPTGQLTM 702
>AF061323-1|AAC16057.1| 1549|Homo sapiens sulfonylurea receptor 2A
protein.
Length = 1549
Score = 32.7 bits (71), Expect = 1.0
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Frame = +1
Query: 37 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-------SVRSRGGNTKY 195
I D W TG P +K+ +P R P R H + R R T+
Sbjct: 614 IGDDSWR----TGESSLPFESCKKHTGVQPKTINRKQPGRYHLDSYEQSTRRLRPAETED 669
Query: 196 RALRLDTGNFSWGSECSTRKPVSLMLCIMHLTM 294
A+++ G FSWGS +T + + + LTM
Sbjct: 670 IAIKVTNGYFSWGSGLATLSNIDIRIPTGQLTM 702
>AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1).
protein.
Length = 178
Score = 29.5 bits (63), Expect = 9.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 324 NAIVVVDATPFRQWYESHYTLPLGXKKGAXLT 419
N I+ V TPF W + H++ P G LT
Sbjct: 5 NPIIAVFRTPFAPWLQFHWSAPFSAWLGTVLT 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,319,014
Number of Sequences: 237096
Number of extensions: 1858517
Number of successful extensions: 4227
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4216
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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