Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30967.Seq
(409 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 25 0.22
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 24 0.66
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 3.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 4.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 4.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 4.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 4.6
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 4.6
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 21 4.6
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 4.6
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 6.1
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 20 8.1
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 20 8.1
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 25.4 bits (53), Expect = 0.22
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 347 AGWRSNGFTCICLCTIGSAK 406
AG SNG C CL T SAK
Sbjct: 181 AGKASNGNKCCCLRTCSSAK 200
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 23.8 bits (49), Expect = 0.66
Identities = 10/39 (25%), Positives = 15/39 (38%)
Frame = +3
Query: 45 RIRTSKCRFSQSYRHLIGHERQRSGGSNQLLLRATQRTC 161
R+ KC F Y+H + + + GS TC
Sbjct: 230 RLTCPKCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYTC 268
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 3.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 74 TELSAPYWARATKEWWK*PTASACHTKNMPIKSKRNLITRWMFTS*T 214
TE P W WW T S T ++R TR TS T
Sbjct: 1028 TEHMHPDWTTKPSTWWSSTTTSPWWTTT---TTRRTTTTRPTTTSTT 1071
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 352 LEVEWVYVHMFVYHWEC 402
LE +++MFV W+C
Sbjct: 291 LEQSRYFIYMFVSVWKC 307
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 352 LEVEWVYVHMFVYHWEC 402
LE +++MFV W+C
Sbjct: 291 LEQSRYFIYMFVSVWKC 307
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 352 LEVEWVYVHMFVYHWEC 402
LE +++MFV W+C
Sbjct: 291 LEQSRYFIYMFVSVWKC 307
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 352 LEVEWVYVHMFVYHWEC 402
LE +++MFV W+C
Sbjct: 291 LEQSRYFIYMFVSVWKC 307
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 324 QAHGIHGNNTRV*QRSGWLLHCQCPPTNN 238
Q H +H N ++ SG+ L PTN+
Sbjct: 127 QHHFLHENKYQLEVDSGYHLGASSTPTNS 155
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 324 QAHGIHGNNTRV*QRSGWLLHCQCPPTNN 238
Q H +H N ++ SG+ L PTN+
Sbjct: 127 QHHFLHENKYQLEVDSGYHLGASSTPTNS 155
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 324 QAHGIHGNNTRV*QRSGWLLHCQCPPTNN 238
Q H +H N ++ SG+ L PTN+
Sbjct: 127 QHHFLHENKYQLEVDSGYHLGASSTPTNS 155
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 20.6 bits (41), Expect = 6.1
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 33 SNCGRIRTSKCRFSQSYRHLIGHERQRSGG 122
S GRI KC + H RQ GG
Sbjct: 630 SGAGRITCEKCGNKIDTSLFVDHIRQCVGG 659
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 20.2 bits (40), Expect = 8.1
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -2
Query: 264 HCQCPPTNNTFRGIDSSVQLV 202
HCQC + RGI ++ +++
Sbjct: 151 HCQCVLADGVERGILTANRMI 171
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 20.2 bits (40), Expect = 8.1
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -2
Query: 264 HCQCPPTNNTFRGIDSSVQLV 202
HCQC + RGI ++ +++
Sbjct: 151 HCQCVLADGVERGILTANRMI 171
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,698
Number of Sequences: 336
Number of extensions: 2629
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8857716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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