Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30965.Seq
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.39 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.39 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   0.51 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   1.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   3.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   8.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   8.3  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         20   8.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   8.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +2

Query: 77  GFKMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM 223
           G K     K+P++A++L++   R+K+  +    +   I +  G  W ++
Sbjct: 472 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 520


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +2

Query: 77  GFKMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM 223
           G K     K+P++A++L++   R+K+  +    +   I +  G  W ++
Sbjct: 364 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 412


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 0.51
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 311 PPPFALNDSKSTMYCSLAFPPFLPI-RFCH 225
           PP   +N+ K  + C  A  P++P  R+C+
Sbjct: 232 PPQLEVNERKENLTCQPAV-PYVPFYRYCY 260


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 256  KAKEQYIVDLESFNANGGGPV 318
            K   QY V +++FN  G GP+
Sbjct: 1067 KTYTQYSVVVQAFNKVGAGPL 1087


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory
          receptor candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 28 LSNKNNTLLSYKNTYLRI 81
          LSNKNNT L   N YL +
Sbjct: 22 LSNKNNTYL-VLNKYLLV 38


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 253 RLFFPFAFVIHGPPD 209
           ++F PF F+ + P D
Sbjct: 491 KIFLPFRFLFYKPED 505


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 253 RLFFPFAFVIHGPPD 209
           ++F PF F I+ P D
Sbjct: 491 KIFLPFRFHIYTPED 505


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 193  QKSRRNLEVHV*QKRMGRKGGKAKEQYIVDLESFNANGGGPVEKKKKTQKR 345
            +K+  NLE    +KR       A ++    L +   N G PV  ++ T +R
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKRFAKLNANGTNAGTPVLSRRLTMRR 1465


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 193  QKSRRNLEVHV*QKRMGRKGGKAKEQYIVDLESFNANGGGPVEKKKKTQKR 345
            +K+  NLE    +KR       A ++    L +   N G PV  ++ T +R
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKRFAKLNANGTNAGTPVLSRRLTMRR 1465


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 193  QKSRRNLEVHV*QKRMGRKGGKAKEQYIVDLESFNANGGGPVEKKKKTQKR 345
            +K+  NLE    +KR       A ++    L +   N G PV  ++ T +R
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKRFAKLNANGTNAGTPVLSRRLTMRR 1465


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 193  QKSRRNLEVHV*QKRMGRKGGKAKEQYIVDLESFNANGGGPVEKKKKTQKR 345
            +K+  NLE    +KR       A ++    L +   N G PV  ++ T +R
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKRFAKLNANGTNAGTPVLSRRLTMRR 1465


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 240 HSLLSYMDLQISPAFLAIS 184
           H LL +M L   P+F   S
Sbjct: 360 HELLGHMPLLADPSFAQFS 378


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = -2

Query: 279 YNVLFFGFSAFSSHSLLSYMDLQISPAFLAISVTFNPGLSSFIFDLA 139
           +NV   G   + SHS     D    P  + +    NP    + +DL+
Sbjct: 167 FNVHNSGTHFWHSHSGFQRSDGTFGPFIVRVPEEDNPHAKLYDYDLS 213


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 195 KKQAKSGGPCMTKANGKKRRKSQRT 269
           K+Q K+G    T+ N   R ++ RT
Sbjct: 216 KRQPKTGREDQTRRNPYYRPRTSRT 240


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 4/16 (25%), Positives = 12/16 (75%)
 Frame = +2

Query: 215 RSMYDKSEWEEKAEKP 262
           ++ +++S+W++  E P
Sbjct: 108 KAKFNESKWQDSGESP 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,799
Number of Sequences: 336
Number of extensions: 1838
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)