Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30965.Seq
         (349 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   1.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   1.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   2.5  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   7.5  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             21   9.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    21   9.9  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 164 CHPLFLI*RCSTIINTLTLVFSVYLSF*ILKYVF 63
           CH + L   CS  I+TLTL       F ++ Y F
Sbjct: 168 CHTVPLAQGCSVYISTLTLTSIAIDRFFVIIYPF 201


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 163  QSRIKSNGDSQKSRRNLEVHV*QKRMGRKGGKAKEQYIVD 282
            ++R  S GDS       E    +K+ G  GG+ K Q  +D
Sbjct: 960  KARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMD 999


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 167 PGLKVTEIAKKAGEIWRSMYDK 232
           P   + E++   GE W  +YDK
Sbjct: 340 PRPDIIEVSPSEGETWDGIYDK 361


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 286 LNLQCIVLWLFRLF 245
           L++QC+  W+F  F
Sbjct: 520 LSMQCVASWIFLYF 533


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 268 QYIVDLESFNANGGGPVEKK 327
           +YIV + ++   G GP  +K
Sbjct: 180 EYIVRVRAYTKQGAGPFSEK 199


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 348 PAFLGFLFFLYGTAAICIK*F*IYNVLFFGFSAFSS 241
           P F   + F +GTA+  I  F +     + + A S+
Sbjct: 550 PQFFQNVIFYFGTASFAIPCFVVLTFFIYYYYAVST 585


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,891
Number of Sequences: 2352
Number of extensions: 7051
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)