Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30963.Seq
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 107 8e-24
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 78 4e-15
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 64 7e-11
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 63 2e-10
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 62 3e-10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 62 4e-10
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 58 6e-09
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 55 3e-08
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 42 3e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 37 0.012
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 36 0.017
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 35 0.038
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 35 0.038
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.067
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 33 0.20
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 31 0.82
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 29 1.9
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 3.3
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 28 5.8
SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06) 28 5.8
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07) 28 5.8
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 27 7.6
SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 27 7.6
SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_23867| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_19767| Best HMM Match : ADK (HMM E-Value=0.26) 27 7.6
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 107 bits (256), Expect = 8e-24
Identities = 50/97 (51%), Positives = 66/97 (68%)
Frame = +1
Query: 253 RSPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPP 432
+S IKLAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A +I+SWL KKTGPP
Sbjct: 74 KSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNKKTGPP 133
Query: 433 AVEVTSAEQAKELIDANXVIVFGFFWTRAQPEPKTFL 543
A ++ +A+ K+ I V V GFF + K FL
Sbjct: 134 AKDLATADAMKDFI-TKEVAVVGFFTDKESDAAKAFL 169
Score = 90.2 bits (214), Expect = 1e-18
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = +2
Query: 35 MRVLIFTAIALLGLALGDEVPTEENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLA 214
M++L +AL+ LA +E+ EE+VL L++ NF+ + +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 215 PEYAKAATKLAEE 253
PEYAKAA +L E
Sbjct: 61 PEYAKAAGQLKSE 73
Score = 48.4 bits (110), Expect = 4e-06
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +2
Query: 20 ADNIEMRVLIFTAIALLGLALGDEVPTE---ENVLXLSKANFETVITTTEY-ILVEFYAP 187
++N++ V F L L E+P + + V L NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 188 WCGHCKSLAPEYAKAATK 241
WCGHCK LAP + + K
Sbjct: 413 WCGHCKQLAPIWDQLGEK 430
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSPIDYSGGRQADDIISWLK---KKTGP 429
I +AK+D+T + E V +PT+K+F + G +DY+GGR DD + +L+ K
Sbjct: 437 IVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGGKAGNE 494
Query: 430 PAVE 441
PA E
Sbjct: 495 PAAE 498
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +2
Query: 86 DEVPTEENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
DEV E++V L+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKAA K+ D
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLND 111
Score = 69.7 bits (163), Expect = 1e-12
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAV 438
PI LA VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S+++ + GP +
Sbjct: 228 PIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQVGPSSR 287
Query: 439 EVTSAEQAKELI-DANXVIVFGFF 507
++S + ++ + + + V + GFF
Sbjct: 288 ILSSLKAVQDFMKEKDDVTIMGFF 311
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Frame = +1
Query: 259 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG---- 426
P+ AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+ ++KK++
Sbjct: 113 PVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPNWK 172
Query: 427 -PPAVEVT-SAEQAKELIDANXVIVFGFF 507
PP +T + E E+++ +++ FF
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFF 201
Score = 67.7 bits (158), Expect = 6e-12
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +2
Query: 95 PTEENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
P L L+K NF V+ +LVEF+APWCGHCK LAPEY KAA +L + D
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHD 226
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKKKTGPP 432
I +AK+DAT D+ +Y V G+PT+ F + +PI + GGR+ D+I ++++K
Sbjct: 576 IVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKFVEEK---- 630
Query: 433 AVEVTSAEQAKE 468
A S E+AK+
Sbjct: 631 ATVSLSKEKAKD 642
Score = 31.5 bits (68), Expect = 0.47
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 23 DNIEMRVLIFTAIALLGLALGDEVP--TEENVLXLSKANFETVITTTEY-ILVEFYAPWC 193
D++ V F A L + VP +E V + F+ ++ + +L+EFYAPWC
Sbjct: 496 DSLREFVEEFKAGNLKPIIKSQPVPKSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWC 555
Query: 194 GHCKSLAPEYAK 229
G +L P + K
Sbjct: 556 G--IALEPTFKK 565
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 78.2 bits (184), Expect = 4e-15
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Frame = +1
Query: 259 PIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPP 432
P+ LAKVD T+ +D YGV GYPTLK FRNG DY G R + II ++KK+ GP
Sbjct: 590 PVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPS 649
Query: 433 AVEVTSAEQ-AKELIDANXVIVFGF 504
+VE+ S + K+L DA +V GF
Sbjct: 650 SVEIKSVDHLEKKLDDAESNVVVGF 674
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2
Query: 107 NVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + D
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 588
Score = 55.2 bits (127), Expect = 3e-08
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +2
Query: 131 NFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAE-EDLLSN*RKLTQLKNRIS 304
NF+ ++ T+ +L+EFYAPWCGHCKSL P+Y + KL + +D++ K+ N
Sbjct: 871 NFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVI--AKMDATANDAP 928
Query: 305 PRATVYEDTRLSNSSGMAVLSTIQVVV 385
P +V + + + G+ ++ I +++
Sbjct: 929 PNFSV-QGIIIISIIGIIIIVIIMIII 954
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 313 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 426
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 64.1 bits (149), Expect = 7e-11
Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +2
Query: 101 EENVLXLSKANFET-VITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 244
+E+V+ L+ NFE V+ + + LVEF+APWCGHC+ LAPE+AKAAT+L
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATEL 126
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +1
Query: 253 RSPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQADDIISWLKK 417
+ +K+ +DAT A Y V+GYPT+K F G S DY GGR A DII +
Sbjct: 127 KGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALD 186
Query: 418 KTG-----PPAVEVTSAEQAKELIDANXVIVFGF 504
K P ++ S E KE + + + V F
Sbjct: 187 KAADSIEPPEVIQAISNEVLKEGCNEHPICVIAF 220
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 295 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 402
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2
Query: 107 NVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + D
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 63
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 62.1 bits (144), Expect = 3e-10
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 98 TEENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 223
T+ V+ L+K NF+ V+ ++ LVEFYAPWCGHCK LAP Y
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTY 61
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +1
Query: 256 SPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKTG 426
S + +AKVDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++++KTG
Sbjct: 72 SDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 61.7 bits (143), Expect = 4e-10
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 LALGDEVPTEE-NVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 244
L D VP +E +L L +NFE + +++LV+FYAPWC HCK +AP+Y A +L
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 95 PTEENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
P VL L+ NF I EY+LV+FYAPWC C+ L+P + AA +L + +
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNN 101
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +2
Query: 86 DEVP---TEENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
DE P T V+ L F+ + +LV FYAPWCGHCK++ PEY AA L E++
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
Query: 257 L 259
+
Sbjct: 133 I 133
Score = 54.0 bits (124), Expect = 8e-08
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2
Query: 89 EVPTEENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 235
E+P+E V LS F++ + +++LV FYAPWCGHCK PE AA
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAA 238
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 RRSPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTG 426
RR I A VD T+E + + +GV GY F + Y+ GR+A D I ++ + G
Sbjct: 264 RRRLIAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREG 319
Query: 427 PP 432
PP
Sbjct: 320 PP 321
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 164 ILVEFYAPWCGHCKSLAPEYAKAATKLAEE 253
+++ Y CG+CK PE+A AAT+ +E
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAAATEHKDE 31
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 259 PIKLAKVDATQEQDLAESYGVRGYPT 336
P LA VDAT+E L + + V GYPT
Sbjct: 134 PGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 107 NVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATK 241
NV L++ F+ + T + ILV FYAP C K A +Y +A K
Sbjct: 335 NVQHLTQDTFDEALKTFDSILVMFYAP-CMKGK-FAFDYERARAK 377
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 55.2 bits (127), Expect = 3e-08
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 110 VLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 253
V L ++F + TE++LV FYAPWCGHCK+ P+Y KAA ++
Sbjct: 149 VKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQ 196
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = +2
Query: 71 GLALGDEVPTEENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 250
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y KAA L +
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHD 98
Query: 251 EDLLSN 268
ED N
Sbjct: 99 EDANCN 104
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 271 AKVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGP 429
AK+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 202 AKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 268 LAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 411
LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 105 LAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 54.0 bits (124), Expect = 8e-08
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +2
Query: 101 EENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 253
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KAA LA+E
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKE 71
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 51.6 bits (118), Expect = 4e-07
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +2
Query: 110 VLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEDL 259
V L+ NF+ +I + +LV+FYAPWC HC+ L P+ AA LA + L
Sbjct: 22 VYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALAAKGL 71
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 122 SKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 244
SK F V+ + + +V+FYAPWCG C AP+Y + A L
Sbjct: 440 SKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML 480
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 74 LALGDEVPTEENVLXLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAA 235
+AL + NV L +F + +T+ + V+F+APWC C L PEY KAA
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 259 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 414
P+ VD T L Y +R YPT + N P + G A DII +++
Sbjct: 335 PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 417
+ +AKVD T + +L +R YPT+K + +G Y+G R A+D+ ++ K
Sbjct: 19 LTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDK 70
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 98 TEENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 235
+E V L+K F+ I + V+FYAPWC HC LAP + + A
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLA 132
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 319 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 411
+ GYPTL F++G +YSG R D + ++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.1 bits (92), Expect = 6e-04
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 125 KANFETVITTTE--YILVEFYAPWCGHCKSLAPEYAKAA 235
+A F +VI T+ ++++FYA WCG C+ + P++ K A
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA 56
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 36.7 bits (81), Expect = 0.012
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 155 TEYILVEFYAPWCGHCKSLAPEYAKAATK 241
T+ ++ +F A WCG CKS+AP Y+ + K
Sbjct: 27 TKLVVADFTASWCGPCKSIAPVYSGLSEK 55
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 274 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 426
K+D Q+LA GV PT +FF+N +D G + +KK G
Sbjct: 63 KIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIG 113
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 36.3 bits (80), Expect = 0.017
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = +2
Query: 104 ENVLXLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEED 256
+ ++ + N + + ++++ + FYAPW HC+ + + + A + A+ D
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRD 76
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 35.1 bits (77), Expect = 0.038
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 441
+ +A V+ +E +LA+ GV+ + F G ++Y G + + + + PP
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYY-GHSCNLTNNVVFQMFDPPVTN 162
Query: 442 VTSAEQAKELIDANXVIVFGFF 507
+ + +Q L DA V G+F
Sbjct: 163 IDNKKQRTLLEDAEGTKVVGYF 184
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 35.1 bits (77), Expect = 0.038
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 164 ILVEFYAPWCGHCKSLAPEYAKAATKLAE 250
++++F A WCG CKS+AP + + K +
Sbjct: 31 VVIDFTATWCGPCKSIAPVFTNLSMKFMD 59
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 274 KVDATQEQDLAESYGVRGYPTLKFFRNGSPID 369
KVD Q Q AES G+R PT F+ N + ID
Sbjct: 64 KVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.067
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 137 ETVITTTEYILVEFYAPWCGHCKSLAP 217
+ VI + +L+ FY PWCG C + AP
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 134 FETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA-----TKLAEEDLLSN*RKLTQLKNR 298
F+ + E ++F A WCG C+ + P++ + A K A+ D+ N ++ ++ NR
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMAKEFKGVKCAKVDVDVNSVEVLRVDNR 63
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 313 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 426
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 131 NFETVITTTEYIL--VEFYAPWCGHCKSLAPEYAKAATKLAEEDLLSN*RKLTQLKNRIS 304
+F+ +++++ +L V F+APW HC + + A + + + N + + ++ +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKENPHVNFIKNQKVVDRIDGANA 70
Query: 305 PRAT 316
P T
Sbjct: 71 PELT 74
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 170 VEFYAPWCGHCKSLAPEYAKAATKL 244
V FYAPWCG + E+ AA+ L
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 319 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 411
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 265 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 366
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 27.9 bits (59), Expect = 5.8
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +2
Query: 188 WCGHCKSLAPEYAKA 232
WCG CK+L P++A++
Sbjct: 8 WCGACKALRPKFAES 22
>SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06)
Length = 257
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 158 EYILVEFYAPWCGHCKSLAPEYAKAAT 238
+YI+ +F CG CK+LAP ++ T
Sbjct: 123 KYIMKKFCQKECGLCKALAPPICQSTT 149
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 107 NVLXLSKANFETVITTTEYILVEFYA 184
NV+ L + NF+ VI + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07)
Length = 272
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +1
Query: 349 RNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANXVIVFGFFWTRAQPE 528
R+ +P+ +G DDI + L + PP E A E+ A+ +V G E
Sbjct: 173 RDLTPLPGNGVPTLDDIPAVLIAEDRPPTYSEAVEEDALEMTAADVAVVHGGHTGETDTE 232
Query: 529 PKT 537
P T
Sbjct: 233 PPT 235
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +1
Query: 337 LKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANXVIVFGFFWTR 516
L+F + S I SGG Q + W A E TSAE+A +D V + G W +
Sbjct: 793 LRFKQEASEIMESGGFQ---LHKWHSNVL--EAEESTSAERANRAVDRPPVKILGIPWDK 847
Query: 517 AQPE 528
+ E
Sbjct: 848 NKDE 851
>SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1019
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +1
Query: 337 LKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANXVIVFGFFWTR 516
L+F + S I SGG Q + W A E TSAE+A +D V + G W +
Sbjct: 472 LRFKQEASEIMESGGFQ---LHKWHSNVL--EAEESTSAERANRAVDRPPVKILGIPWDK 526
Query: 517 AQPE 528
+ E
Sbjct: 527 NKDE 530
>SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 201 ANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSR 305
+N H++TPR ++ W K+ +E ++R SR
Sbjct: 91 SNAKHKDTPRPKEDWYKETQSSLAEELDDTRQRSR 125
>SB_23867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 183 LHGAATAN--LWHRNTPRQQQSWLKKISYQTSES*RNSR 293
L+G ATA L+ Q+Q +LKKI +T E RNSR
Sbjct: 133 LNGMATAYDFLYPYMDSNQRQKYLKKIVNETRELYRNSR 171
>SB_19767| Best HMM Match : ADK (HMM E-Value=0.26)
Length = 336
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 183 LHGAATAN--LWHRNTPRQQQSWLKKISYQTSES*RNSR 293
L+G ATA L+ Q+Q +LKKI +T E RNSR
Sbjct: 10 LNGMATAYDFLYPYMDSNQRQKYLKKIVNETRELYRNSR 48
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,557,423
Number of Sequences: 59808
Number of extensions: 292483
Number of successful extensions: 702
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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