Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30962.Seq
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5TQZ5 Cluster: ENSANGP00000027586; n=1; Anopheles gamb...    52   5e-06
UniRef50_A4B732 Cluster: Putative oxidoreductase; n=1; Alteromon...    32   6.2  
UniRef50_A0LNC8 Cluster: GGDEF domain containing protein; n=1; S...    32   6.2  
UniRef50_Q3LW13 Cluster: RNA helicase; n=2; Bigelowiella natans|...    32   6.2  
UniRef50_UPI00004988EE Cluster: phosphoglycerate mutase family p...    32   8.2  

>UniRef50_Q5TQZ5 Cluster: ENSANGP00000027586; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000027586 - Anopheles gambiae
           str. PEST
          Length = 169

 Score = 52.4 bits (120), Expect = 5e-06
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = +1

Query: 340 SWRVYGKRISERFMKPATSATIEQLKESVSKLKLPKE 450
           SWR YG RI+ RF++P+T+  IE+LK SV++L LPKE
Sbjct: 133 SWRKYGNRITNRFIRPSTAKEIEELKLSVARLNLPKE 169


>UniRef50_A4B732 Cluster: Putative oxidoreductase; n=1; Alteromonas
           macleodii 'Deep ecotype'|Rep: Putative oxidoreductase -
           Alteromonas macleodii 'Deep ecotype'
          Length = 452

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 83  DNAVFNNTLYEALYLQIEDTLSFAKDFFESCFSSLPIDNFPKSFLN 220
           DNA     LY+A+          A D+F S + S+ +D+ P+ F+N
Sbjct: 325 DNATEKKRLYDAMVKSFPALKGIAMDYFWSGWVSVSLDSMPRIFVN 370


>UniRef50_A0LNC8 Cluster: GGDEF domain containing protein; n=1;
           Syntrophobacter fumaroxidans MPOB|Rep: GGDEF domain
           containing protein - Syntrophobacter fumaroxidans
           (strain DSM 10017 / MPOB)
          Length = 531

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 349 VYGKRISERFMKPATSATIEQLKESVSKLKLPKEHTP 459
           V+ K+I+E F++PA S T E L  S       +E TP
Sbjct: 470 VFAKKITESFVRPAASETAENLTVSFGITGFAREDTP 506


>UniRef50_Q3LW13 Cluster: RNA helicase; n=2; Bigelowiella
           natans|Rep: RNA helicase - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 468

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 19/74 (25%), Positives = 34/74 (45%)
 Frame = +2

Query: 20  KFNNFPLCR*FIKKTNVMSVFDNAVFNNTLYEALYLQIEDTLSFAKDFFESCFSSLPIDN 199
           + NN+ +C  FI+  NV   +D    N  L + L ++ +  +S+   F+     S+ + N
Sbjct: 374 RLNNYGICISFIRNENVKEFYDLFKKNKMLSKKLKIK-KKIISYFSSFYNFMLKSIKLPN 432

Query: 200 FPKSFLNLDQFTFY 241
             KS    + F  Y
Sbjct: 433 CNKSSAFKNLFKMY 446


>UniRef50_UPI00004988EE Cluster: phosphoglycerate mutase family
           protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
           phosphoglycerate mutase family protein - Entamoeba
           histolytica HM-1:IMSS
          Length = 693

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = -1

Query: 214 ERFGKIIDRK**KTRFKEVFCKRQSILDLKIQSFV*SVIKNSVVENGHYIGFLYK 50
           +++G  ID     +R KE  CK+Q IL+ ++  +V  + KN   E   Y G  YK
Sbjct: 134 KKYGTDIDFTIHYSRMKEGECKQQIILNDQVYGYVFPIKKNDGSEYWTYFGTAYK 188


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,887,487
Number of Sequences: 1657284
Number of extensions: 6946810
Number of successful extensions: 16599
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16598
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)