Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30951.Seq
(547 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 118 1e-25
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 112 4e-24
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 88 1e-16
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 63 4e-09
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 59 8e-08
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 58 2e-07
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 56 7e-07
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 55 9e-07
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 52 9e-06
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 38 0.11
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 38 0.20
UniRef50_A4RHF5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.7
UniRef50_Q4DP99 Cluster: Putative uncharacterized protein; n=3; ... 32 7.5
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 32 7.5
UniRef50_Q0RF37 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 118 bits (283), Expect = 1e-25
Identities = 57/100 (57%), Positives = 75/100 (75%)
Frame = +1
Query: 76 AVAYCKRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILYG*XQSDSXXWWSCST 255
AVA+CKRG+G+++VNGRPL+++E R LQYKL EP+ + + + +
Sbjct: 21 AVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQ 80
Query: 256 VYAIRQAISKALXAFYQKYVDEASKKEIKDILVQYDRSLL 375
+YAIRQ+ISKAL A+YQKYVDEASKKEIKDIL+QYDR+LL
Sbjct: 81 IYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLL 120
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +3
Query: 384 PRRCEPKKXGGPGARAXYQKSYR 452
PRRCE KK GGPGARA YQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 112 bits (270), Expect = 4e-24
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +1
Query: 76 AVAYCKRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILYG*XQSDSXXWWSCST 255
AVAYCKRG+G+L+VNGRPL+ +E L+YKL EPI + + + + +
Sbjct: 23 AVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKERFAGVDIRIRVKGGGNVAQ 82
Query: 256 VYAIRQAISKALXAFYQKYVDEASKKEIKDILVQYDRSLL 375
+YAIRQAISKAL A+YQKYVDE SKKEIKD L+QYDR+LL
Sbjct: 83 IYAIRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLL 122
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +3
Query: 384 PRRCEPKKXGGPGARAXYQKSYR 452
PRRCEPKK GGPGARA YQKSYR
Sbjct: 126 PRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 88.2 bits (209), Expect = 1e-16
Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +1
Query: 40 VPSIRT*ENRPPA--VAYCKRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILYG 213
VPS++T + A VA+ K G G+++VNG P+ LVE +L++K+ EP+ K
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 214 *XQSDSXXWWSCSTVYAIRQAISKALXAFYQKYVDEASKKEIKDILVQYDRSLL 375
+ S VYAIRQAI+K L A++QKYVDE SK E+K YDR+LL
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLL 117
Score = 37.5 bits (83), Expect = 0.20
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3
Query: 387 RRCEPKKXGGPGARAXYQKSYR 452
RR EPKK GG GAR+ +QKSYR
Sbjct: 122 RRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +1
Query: 250 STVYAIRQAISKALXAFYQKYVDEASKKEIKDILVQYDRSLL 375
S VYAIRQAI+K+L A+YQKYVDE SK ++K VQYDR+LL
Sbjct: 88 SQVYAIRQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLL 129
Score = 41.1 bits (92), Expect = 0.016
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 387 RRCEPKKXGGPGARAXYQKSYR 452
RR EPKK GG GARA YQKSYR
Sbjct: 134 RRAEPKKFGGRGARARYQKSYR 155
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 58.8 bits (136), Expect = 8e-08
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = +1
Query: 34 RPVPSIRT*ENRPPAVAYC---KRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKI 204
R V S+ T + AVA C + G +R+N P L+ L+ KL+E I Q I
Sbjct: 3 RSVKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANI 62
Query: 205 LYG*XQSDSXXWWSCSTVYAIRQAISKALXAFYQKYVDEASKKEIKDILVQYDR 366
S VYA+R A +KA+ AFY Y DE K+EI+ L+ +DR
Sbjct: 63 KDLSFDITCKIGGDVSRVYAVRMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDR 116
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 387 RRCEPKKXGGPGARAXYQKSYR 452
R+ EPKK GGPGARA YQKSYR
Sbjct: 124 RKREPKKFGGPGARARYQKSYR 145
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 57.6 bits (133), Expect = 2e-07
Identities = 32/100 (32%), Positives = 51/100 (51%)
Frame = +1
Query: 76 AVAYCKRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILYG*XQSDSXXWWSCST 255
A+ K+G G +++NG P++LV ++ K+ EP + L S S
Sbjct: 14 AITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFDIFSKGGGKVSQ 73
Query: 256 VYAIRQAISKALXAFYQKYVDEASKKEIKDILVQYDRSLL 375
+YAIRQ+ISK L +Y KY+ + +K + YD+ LL
Sbjct: 74 IYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLL 113
Score = 36.7 bits (81), Expect = 0.35
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3
Query: 390 RCEPKKXGGPGARAXYQKSYR 452
R EPKK GG GARA +QKSYR
Sbjct: 119 RIEPKKYGGLGARARFQKSYR 139
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 55.6 bits (128), Expect = 7e-07
Identities = 36/100 (36%), Positives = 52/100 (52%)
Frame = +1
Query: 76 AVAYCKRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILYG*XQSDSXXWWSCST 255
AVA+ K G G + VN PL LV +L+ K+ EPI + S
Sbjct: 36 AVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMNIKVAGGGHVSQ 95
Query: 256 VYAIRQAISKALXAFYQKYVDEASKKEIKDILVQYDRSLL 375
+YA+RQAIS+ + A + DEA++ E++ LV YDR L+
Sbjct: 96 IYAVRQAISRGVLASVK---DEAARSELRAKLVSYDRQLV 132
Score = 40.7 bits (91), Expect = 0.021
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = +3
Query: 384 PRRCEPKKXGGPGARAXYQKSYR 452
PRRCE KK GG GARA QKSYR
Sbjct: 136 PRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 55.2 bits (127), Expect = 9e-07
Identities = 36/94 (38%), Positives = 49/94 (52%)
Frame = +1
Query: 76 AVAYCKRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILYG*XQSDSXXWWSCST 255
AV C+ G G +R+N PL+++ LQYKL E + ++
Sbjct: 32 AVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGMDIHVRVKGSGHVVQ 91
Query: 256 VYAIRQAISKALXAFYQKYVDEASKKEIKDILVQ 357
+YA+ Q ISKAL Y KYVDEAS +EIKD L +
Sbjct: 92 IYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +1
Query: 250 STVYAIRQAISKALXAFYQKYVDEASKKEIKDILVQYDRSLL 375
S +YAIRQAI+K+L A+Y KY D AS E++ + V YDR+LL
Sbjct: 132 SQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLL 173
Score = 47.6 bits (108), Expect = 2e-04
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = +1
Query: 76 AVAYCKRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILY 210
AVA+CK G G++R+NG+P+ LV+ +L++K+ EP+ + K +
Sbjct: 17 AVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFSF 61
Score = 37.1 bits (82), Expect = 0.26
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3
Query: 387 RRCEPKKXGGPGARAXYQKSYR 452
RR EPKK GG GARA QKSYR
Sbjct: 178 RRSEPKKFGGHGARARRQKSYR 199
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 52.0 bits (119), Expect = 9e-06
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 109 LRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILYG*XQSDSXXWWS--CSTVYAIRQAIS 282
++VNG PL + L+ K+ E I G Y + D S YA RQAI+
Sbjct: 35 IKVNGVPLQQILPDTLRAKIMEAITVV--GSKYYSRLRIDVAVHGGGQVSQAYAARQAIA 92
Query: 283 KALXAFYQKYVDEASKKEIKDILVQYDRSLL 375
K L AF+QKY +E K +KD + YD+ LL
Sbjct: 93 KGLIAFFQKYHNEVEKAALKDKFLAYDKFLL 123
Score = 36.3 bits (80), Expect = 0.46
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3
Query: 384 PRRCEPKKXGGPGARAXYQKSYR 452
PRRCEPKK G AR + KSYR
Sbjct: 127 PRRCEPKKWGRHSARTRFTKSYR 149
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 38.3 bits (85), Expect = 0.11
Identities = 18/25 (72%), Positives = 18/25 (72%)
Frame = +3
Query: 378 G*PRRCEPKKXGGPGARAXYQKSYR 452
G RR EPKK GGPGAR QKSYR
Sbjct: 125 GDARRKEPKKFGGPGARRRKQKSYR 149
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 37.5 bits (83), Expect = 0.20
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 76 AVAYCKRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILYG*XQSDSXXWWS--C 249
A A + G G +R+NG+P++++E + ++ + EP+ A G+ ++ D
Sbjct: 15 ARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILA--GEEIWNSVDIDVKVQGGGFM 72
Query: 250 STVYAIRQAISKALXAFYQKYVDEASKKEIKDILVQYDRSLL 375
A R AI++AL V+ +K+ ++YDR++L
Sbjct: 73 GQAEAARIAIARAL-------VEWTGDMNLKEKFIKYDRTML 107
>UniRef50_A4RHF5 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1138
Score = 32.7 bits (71), Expect = 5.7
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +1
Query: 136 LVEXRLL-QYKLQEPIPFARQG-KILYG*XQSDSXXWWSCSTV-YAIRQAISKALXAFYQ 306
LV+ RL Q ++ + R G ++LY +S+S WW+ + + +A+R+ + +
Sbjct: 772 LVQDRLTGQINEEKMSVYVRLGIRLLYKGLKSNSIMWWATNKLGFAVRKLLKSLSIKQGK 831
Query: 307 KYVDEASKKEIKDIL 351
KY D AS EI+ +
Sbjct: 832 KYDDPASTAEIQKFI 846
>UniRef50_Q4DP99 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 1427
Score = 32.3 bits (70), Expect = 7.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 127 GARLHAAFHDHACNTQLRVGGFLTSEYLGRAWD 29
G+ H+A HD A NTQLR+ + E G WD
Sbjct: 353 GSEQHSAVHDFAVNTQLRLLVTVGPERYGIVWD 385
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 32.3 bits (70), Expect = 7.5
Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Frame = +1
Query: 67 RPPAVAYCKRGHGMLRVNGRPLDLVEXRLLQYKLQEPIPFARQGKILYG*XQSDSXXWWS 246
R A A + G G + +NG PL++ + + K+ EP+ A +G +
Sbjct: 15 RAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVEGGGV 74
Query: 247 CSTVYAIRQAISKALXAFYQ---------KYVDEASKKEIKDILVQYDRSLL 375
A+R AI++ L F++ + +D+ S ++++ +++DR++L
Sbjct: 75 MGQADAVRMAIARGLVEFFRCEESDDELCRMMDKIS-RDLRTAFLEHDRTML 125
>UniRef50_Q0RF37 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 466
Score = 31.9 bits (69), Expect = 9.9
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 66 PPTRSCVLQAWSWNAACKRAPIGLG*AQTAAVQTSGTYPFCSAR 197
PP+ V++A S A PI AA +T+GT PF AR
Sbjct: 335 PPSADLVVRATSLGRAHHACPITTALCAAAAARTAGTLPFAYAR 378
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,856,881
Number of Sequences: 1657284
Number of extensions: 9296050
Number of successful extensions: 21376
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21364
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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