Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30947.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    28   0.26 
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    27   0.35 
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    26   0.80 
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   3.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   3.2  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 368 SPLLKXLRLHILSFLNALPGGNGYAFSGLGFR 273
           S  L  LRLH + F++    G GYAF    F+
Sbjct: 768 SAFLHTLRLHWVEFMSKFYEGLGYAFKPFSFK 799


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +3

Query: 216 AGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRK-GIKETQNVKSQXLQKWRTTEG 380
           A EGA K  ++    ++G+P PKP + +T  T++  +K  + V +  L+  ++  G
Sbjct: 130 AAEGAPKPQRKL--SDRGEPPPKPDRRITTTTQQIVVKLPETVANVSLEHQQSGAG 183


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 368 SPLLKXLRLHILSFLNALPGGNGYAFSGLGFR 273
           S  L  LRLH + F++    G GY F    F+
Sbjct: 808 SAFLHTLRLHWVEFMSKFYEGLGYGFQPFSFK 839


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 228 AQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQN 338
           AQ +D++ R  N+G+  P+P   + +P    +K+ ++
Sbjct: 89  AQTQDEQ-RALNEGEVPPEPVANIHIPKLSELKDLKH 124


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 228 AQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQN 338
           AQ +D++ R  N+G+  P+P   + +P    +K+ ++
Sbjct: 89  AQTQDEQ-RALNEGEVPPEPVANIHIPKLSELKDLKH 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,905
Number of Sequences: 2352
Number of extensions: 8167
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)