Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30947.Seq
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-138|AAF51469.2| 826|Drosophila melanogaster CG2839-PA ... 33 0.39
AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p pro... 29 3.6
AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA... 29 3.6
AY051984-1|AAK93408.1| 838|Drosophila melanogaster LD45365p pro... 29 6.3
AF220364-1|AAF37265.1| 838|Drosophila melanogaster Plenty of SH... 29 6.3
AE013599-2508|AAF57833.1| 838|Drosophila melanogaster CG4909-PA... 29 6.3
BT009964-1|AAQ22433.1| 405|Drosophila melanogaster RE70525p pro... 28 8.4
AF132183-1|AAD34771.1| 834|Drosophila melanogaster unknown prot... 28 8.4
AE014297-2518|AAF55551.2| 834|Drosophila melanogaster CG18617-P... 28 8.4
AE014297-2517|AAF55552.2| 834|Drosophila melanogaster CG18617-P... 28 8.4
AE014134-2090|AAF53116.1| 814|Drosophila melanogaster CG12602-P... 28 8.4
>AE014134-138|AAF51469.2| 826|Drosophila melanogaster CG2839-PA
protein.
Length = 826
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 222 EGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQXLQK-WRTTEG*GTC 392
E +KED+R R+E K K E K + + KET+ + +K W T +G C
Sbjct: 703 EEKRKEDERKREEEKRKEEEKRKEEERKEEERKKKETEEKEKNMQEKCWVTKKGTNKC 760
>AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p
protein.
Length = 844
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 368 SPLLKXLRLHILSFLNALPGGNGYAFSGLGFR 273
S L LRLH + F++ GNGY F+ F+
Sbjct: 804 SAFLHTLRLHWVEFMSKFYVGNGYPFTPFSFK 835
>AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA
protein.
Length = 844
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 368 SPLLKXLRLHILSFLNALPGGNGYAFSGLGFR 273
S L LRLH + F++ GNGY F+ F+
Sbjct: 804 SAFLHTLRLHWVEFMSKFYVGNGYPFTPFSFK 835
>AY051984-1|AAK93408.1| 838|Drosophila melanogaster LD45365p
protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVP 308
++A AG+G +K ++ + + KP+P PA+ V P
Sbjct: 78 QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPP 111
>AF220364-1|AAF37265.1| 838|Drosophila melanogaster Plenty of SH3s
protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVP 308
++A AG+G +K ++ + + KP+P PA+ V P
Sbjct: 78 QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPP 111
>AE013599-2508|AAF57833.1| 838|Drosophila melanogaster CG4909-PA
protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVP 308
++A AG+G +K ++ + + KP+P PA+ V P
Sbjct: 78 QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPP 111
>BT009964-1|AAQ22433.1| 405|Drosophila melanogaster RE70525p
protein.
Length = 405
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 368 SPLLKXLRLHILSFLNALPGGNGYAFSGLGFR 273
S L LRLH + F++ G GYAF F+
Sbjct: 365 SAFLHTLRLHWVEFMSKFYEGAGYAFEPFAFK 396
>AF132183-1|AAD34771.1| 834|Drosophila melanogaster unknown
protein.
Length = 834
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 368 SPLLKXLRLHILSFLNALPGGNGYAFSGLGFR 273
S L LRLH + F++ G GYAF F+
Sbjct: 794 SAFLHTLRLHWVEFMSKFYEGMGYAFQPFSFK 825
>AE014297-2518|AAF55551.2| 834|Drosophila melanogaster CG18617-PB,
isoform B protein.
Length = 834
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 368 SPLLKXLRLHILSFLNALPGGNGYAFSGLGFR 273
S L LRLH + F++ G GYAF F+
Sbjct: 794 SAFLHTLRLHWVEFMSKFYEGMGYAFQPFSFK 825
>AE014297-2517|AAF55552.2| 834|Drosophila melanogaster CG18617-PA,
isoform A protein.
Length = 834
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 368 SPLLKXLRLHILSFLNALPGGNGYAFSGLGFR 273
S L LRLH + F++ G GYAF F+
Sbjct: 794 SAFLHTLRLHWVEFMSKFYEGMGYAFQPFSFK 825
>AE014134-2090|AAF53116.1| 814|Drosophila melanogaster CG12602-PA
protein.
Length = 814
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 368 SPLLKXLRLHILSFLNALPGGNGYAFSGLGFR 273
S L LRLH + F++ G GYAF F+
Sbjct: 774 SAFLHTLRLHWVEFMSKFYEGAGYAFEPFAFK 805
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,050,344
Number of Sequences: 53049
Number of extensions: 397118
Number of successful extensions: 1256
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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