Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30945.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MSF5 Cluster: GM16138p; n=12; Arthropoda|Rep: GM16138... 116 4e-25
UniRef50_A7RHU7 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 71 3e-11
UniRef50_Q28WM7 Cluster: GA10879-PA; n=1; Drosophila pseudoobscu... 70 6e-11
UniRef50_Q20589 Cluster: Putative uncharacterized protein; n=2; ... 69 1e-10
UniRef50_A3EXS3 Cluster: Putative ribonuclease; n=1; Maconellico... 69 1e-10
UniRef50_Q9NDV2 Cluster: Ribonuclease precursor; n=1; Ceratitis ... 57 4e-07
UniRef50_O02142 Cluster: Putative uncharacterized protein; n=2; ... 56 1e-06
UniRef50_Q9W286 Cluster: CG11269-PA; n=1; Drosophila melanogaste... 54 3e-06
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 39 0.14
UniRef50_Q9WUP4 Cluster: SRD5A2L; n=24; Tetrapoda|Rep: SRD5A2L -... 38 0.31
UniRef50_A2EQF7 Cluster: Putative uncharacterized protein; n=2; ... 36 0.72
>UniRef50_Q8MSF5 Cluster: GM16138p; n=12; Arthropoda|Rep: GM16138p -
Drosophila melanogaster (Fruit fly)
Length = 95
Score = 116 bits (280), Expect = 4e-25
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +1
Query: 1 GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYT 180
GPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+ HS+EDF + Y
Sbjct: 5 GPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEEY--HSLEDFYAAANRAYN 62
Query: 181 LNAQNCWIAALLYLITLVVSGHQF 252
NA NCWIAA +Y++TL++S QF
Sbjct: 63 QNAYNCWIAACIYVLTLLLSAQQF 86
>UniRef50_A7RHU7 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 88
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/83 (42%), Positives = 55/83 (66%)
Frame = +1
Query: 1 GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYT 180
GPKLS C +LS+WG+I L L+GVF+ +++AL+ED+P D+ + G++
Sbjct: 6 GPKLSNCCFILSLWGVIMLLLLGVFFKTKSIALVEDIPKDKG-------------DAGFS 52
Query: 181 LNAQNCWIAALLYLITLVVSGHQ 249
A+NC+IAA +Y +TL++S HQ
Sbjct: 53 STAKNCFIAAGIYGVTLIISIHQ 75
>UniRef50_Q28WM7 Cluster: GA10879-PA; n=1; Drosophila
pseudoobscura|Rep: GA10879-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 94
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +1
Query: 1 GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYT 180
GPK S L +S W +IQLTLMG+F+ + ++AL++DLP HS+EDF + Y
Sbjct: 4 GPKCSFFCLFISAWAVIQLTLMGIFFLLNSMALIDDLPLTP--IFHSLEDFRTHADVTYQ 61
Query: 181 LNAQNCWIAALLYLITLVVS 240
+ A C++ ALLYL ++S
Sbjct: 62 VVAIRCFVTALLYLCFGILS 81
>UniRef50_Q20589 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 95
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFD-EKNXPHSIEDFVIEVEKGY 177
GPK+S +V+SVWG+I L L+GVF+YI+AV L DL F+ P S+ ++ Y
Sbjct: 9 GPKMSAFCMVMSVWGVIFLGLLGVFFYIQAVTLFPDLHFEGHGKVPSSV------IDAKY 62
Query: 178 TLNAQNCWIAALLYLITLV 234
A CWIAA LY +TL+
Sbjct: 63 NEKATQCWIAAGLYAVTLI 81
>UniRef50_A3EXS3 Cluster: Putative ribonuclease; n=1;
Maconellicoccus hirsutus|Rep: Putative ribonuclease -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 72
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +1
Query: 64 MGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITLVVSG 243
MG FY + ++AL EDLP E+ S E F GY NA NCWIAA LY+ITL+VSG
Sbjct: 1 MGFFYKVHSLALAEDLPGLEEPF-ESHEKFYSVANTGYDQNAYNCWIAACLYVITLLVSG 59
Query: 244 HQF 252
HQF
Sbjct: 60 HQF 62
>UniRef50_Q9NDV2 Cluster: Ribonuclease precursor; n=1; Ceratitis
capitata|Rep: Ribonuclease precursor - Ceratitis
capitata (Mediterranean fruit fly)
Length = 138
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +1
Query: 34 SVWGIIQLTLM-GVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYTLNA 189
SVWGIIQL LM G+F+YI +VAL+EDLP DE+ +S+E+F Y NA
Sbjct: 73 SVWGIIQLVLMMGLFFYINSVALIEDLPIDEEF--NSVEEFYTAATSAYNQNA 123
>UniRef50_O02142 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 93
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSI-EDFVIEVEKGY 177
GP + L L++WG + + ++G +Y ++V L EDLP + K S+ D K Y
Sbjct: 3 GPMCTGIFLFLALWGTVFMAILGGLFYNQSVGLFEDLPKESKAMEKSLWADRTTNFNKLY 62
Query: 178 TLNAQNCWIAALLYLITLVVSGHQFC*II 264
NA NCWIA +Y+ V+ + C ++
Sbjct: 63 QQNAYNCWIACGVYIGIAVLLSLRACCLV 91
>UniRef50_Q9W286 Cluster: CG11269-PA; n=1; Drosophila
melanogaster|Rep: CG11269-PA - Drosophila melanogaster
(Fruit fly)
Length = 107
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +1
Query: 1 GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYT 180
G K L L +S WG + L L+G+F+Y++++ LLE LP + P S E F + ++ Y
Sbjct: 4 GRKCCLFCLFMSAWGFLMLNLLGIFFYVQSLMLLESLPLPH-HFP-SQEAFKEQADEAYQ 61
Query: 181 LNAQNCWIAALLYL 222
+ C++AA+ YL
Sbjct: 62 DVSTRCFVAAVFYL 75
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 38.7 bits (86), Expect = 0.14
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 584 KWADDLWQYAGKNWMRKVEDRSLWR 510
+W DDL + AG WM+ +DRSLW+
Sbjct: 459 RWTDDLVKVAGSTWMQAAQDRSLWK 483
>UniRef50_Q9WUP4 Cluster: SRD5A2L; n=24; Tetrapoda|Rep: SRD5A2L -
Mus musculus (Mouse)
Length = 330
Score = 37.5 bits (83), Expect = 0.31
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +1
Query: 46 IIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYTLNAQNCWIAALLYLI 225
++Q V+Y + + +L +P D+KN +V+ G L Q W L ++
Sbjct: 172 VVQYCFGLVYYVLVGLTVLSQVPMDDKNV------YVL----GKNLLIQARWFHILGMVM 221
Query: 226 TLVVSGHQF-C*IIVPQLVCNIEGVVIFAVNSIPL*NCFFFCQKQVAICNYVCN*VVFLS 402
S HQ+ C +I+ L N +GVVI + IP + F + V+ NY+ ++++S
Sbjct: 222 FFWSSAHQYKCHVILSNLRRNKKGVVIHCQHRIPFGDWF----EYVSSANYLAELMIYIS 277
Query: 403 I 405
+
Sbjct: 278 M 278
>UniRef50_A2EQF7 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 126
Score = 36.3 bits (80), Expect = 0.72
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +1
Query: 19 CGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYTLNAQNC 198
C +V+SVWGI+ L +M + + I + DL N H+ +D N +
Sbjct: 17 CYVVISVWGIVMLGIMAILFGIDKAGTIGDL-----NPHHTRKD-----------NTKTL 60
Query: 199 WIAALLYLITLVVSGHQFC 255
WI ++Y I ++S C
Sbjct: 61 WINVIIYFIVCILSSISLC 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,195,214
Number of Sequences: 1657284
Number of extensions: 12466059
Number of successful extensions: 26798
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26786
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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