Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30943.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.33 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.33 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    28   0.33 
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   4.0  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   9.2  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   9.2  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    23   9.2  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 202 VDDIGDVTVTNDGATILKCWK 264
           +DD  + T+TND AT+++ WK
Sbjct: 34  MDDALNTTLTNDKATLIQVWK 54


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 202 VDDIGDVTVTNDGATILKCWK 264
           +DD  + T+TND AT+++ WK
Sbjct: 34  MDDALNTTLTNDKATLIQVWK 54


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 202 VDDIGDVTVTNDGATILKCWK 264
           +DD  + T+TND AT+++ WK
Sbjct: 12  MDDALNTTLTNDKATLIQVWK 32


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 128 ILCSHWVSAGSCPCYRQRCSYSRHFLLYF*HKIHFKIAVT 9
           ++C  +     CP  R R +Y+R   L    + HF   +T
Sbjct: 125 VVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLT 164


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 468 NLTVTVESLGRPSLST 515
           NLT+T+E L RP+ ST
Sbjct: 62  NLTLTLEELLRPNSST 77


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 491 TWQAVSINTAKTTMSSKL 544
           TW A+  +  KTTMS+K+
Sbjct: 80  TWDALQKHHQKTTMSTKV 97


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription
          factor Deformed protein.
          Length = 59

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 83 RQRCSYSRHFLLYF*HKIHFKIAVT 9
          RQR +Y+RH +L    + H+   +T
Sbjct: 3  RQRTAYTRHQILELEKEFHYNXYLT 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,322
Number of Sequences: 2352
Number of extensions: 15126
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)