Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30943.Seq
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 163 1e-40
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 163 1e-40
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 86 3e-17
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 86 3e-17
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 86 3e-17
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 82 4e-16
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 77 1e-14
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 73 3e-13
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 73 3e-13
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 71 6e-13
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 71 6e-13
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 65 4e-11
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 58 8e-09
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 58 8e-09
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 32 0.34
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 30 1.8
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 29 2.4
U40800-14|AAA81498.4| 727|Caenorhabditis elegans Hypothetical p... 29 2.4
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical ... 29 2.4
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 3.2
Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical p... 27 9.8
Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical p... 27 9.8
AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 163 bits (396), Expect = 1e-40
Identities = 87/150 (58%), Positives = 105/150 (70%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K LEVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSLSTQPKQPCHLN*LELMQISSRRWL*MLHRAIKT 608
RLACKEAVKYI +N++ T +S+GR S+ K + + A++
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRV 185
Query: 609 MNPRGNTIYPIQAINILKAPGRSAXGSVLV 698
N G YPI A+N+LKA G+SA SVLV
Sbjct: 186 EN-NGKVTYPINAVNVLKAHGKSARESVLV 214
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
AA AIANIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 28 AAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 163 bits (396), Expect = 1e-40
Identities = 87/150 (58%), Positives = 105/150 (70%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K LEVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSLSTQPKQPCHLN*LELMQISSRRWL*MLHRAIKT 608
RLACKEAVKYI +N++ T +S+GR S+ K + + A++
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRV 185
Query: 609 MNPRGNTIYPIQAINILKAPGRSAXGSVLV 698
N G YPI A+N+LKA G+SA SVLV
Sbjct: 186 EN-NGKVTYPINAVNVLKAHGKSARESVLV 214
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
AA AIANIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 28 AAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/63 (61%), Positives = 52/63 (82%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K + V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 429 RLA 437
R A
Sbjct: 128 RRA 130
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 4/43 (9%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILK 255
A AI ++VKS+LGP G+DK+L+ + G + VTNDGATILK
Sbjct: 27 AIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/63 (61%), Positives = 52/63 (82%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K + V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 429 RLA 437
R A
Sbjct: 128 RRA 130
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 4/43 (9%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILK 255
A AI ++VKS+LGP G+DK+L+ + G + VTNDGATILK
Sbjct: 27 AIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/63 (61%), Positives = 52/63 (82%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K + V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 429 RLA 437
R A
Sbjct: 128 RRA 130
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 4/43 (9%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILK 255
A AI ++VKS+LGP G+DK+L+ + G + VTNDGATILK
Sbjct: 27 AIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 81.8 bits (193), Expect = 4e-16
Identities = 34/80 (42%), Positives = 58/80 (72%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
++ + V+HPAAK ++E+A+ QDEE GDGTTSV+I+A E++ +A ++ K HPT II Y
Sbjct: 69 LREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAY 128
Query: 429 RLACKEAVKYIQDNLTVTVE 488
R A ++ +++ ++ + TV+
Sbjct: 129 RQALEDMIQWSENKFSKTVD 148
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
A IA+++++SLGP + KML+D +G + +TNDG IL+
Sbjct: 31 ACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILR 70
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/69 (46%), Positives = 52/69 (75%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 429 RLACKEAVK 455
LACK+A++
Sbjct: 139 DLACKKALE 147
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
AA A+AN +++SLGP GLDKMLV GDVT+TNDGATI++
Sbjct: 41 AARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIME 80
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/69 (46%), Positives = 52/69 (75%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 429 RLACKEAVK 455
LACK+A++
Sbjct: 139 DLACKKALE 147
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
AA A+AN +++SLGP GLDKMLV GDVT+TNDGATI++
Sbjct: 41 AARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIME 80
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/69 (46%), Positives = 52/69 (75%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 429 RLACKEAVK 455
LACK+A++
Sbjct: 139 DLACKKALE 147
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
AA A+AN +++SLGP GLDKMLV GDVT+TNDGATI++
Sbjct: 41 AARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIME 80
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K+L++ PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 429 RLACKEAVKYIQD 467
AC++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
A +A+ ++++LGP GLDK++VD G T++NDGATILK
Sbjct: 28 ACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILK 67
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 479 NSRVTWQAVSINTAKTTMSSKLIGADADFFSEMVVDA 589
N + + + A TT+SSKL+ + FF+ M+VDA
Sbjct: 144 NGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA 180
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K+L++ PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 429 RLACKEAVKYIQD 467
AC++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
A +A+ ++++LGP GLDK++VD G T++NDGATILK
Sbjct: 28 ACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILK 67
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 479 NSRVTWQAVSINTAKTTMSSKLIGADADFFSEMVVDA 589
N + + + A TT+SSKL+ + FF+ M+VDA
Sbjct: 144 NGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA 180
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 71.3 bits (167), Expect = 6e-13
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+ + V HP AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSLSTQPKQPCHLN*LELMQISSRRWL--*MLHRAI 602
+ A EA K I D ++ V+ L +L + L +S WL M A+
Sbjct: 137 QSAAAEAEK-ILDEMSSPVD-LSNDALLNKMATTS----LNSKVVSQHSWLLAPMAVNAV 190
Query: 603 -KTMNPRGNTIYPIQAINILKAPGRSAXGSVLV 698
K +N ++ ++ I I+K G + S L+
Sbjct: 191 KKIINSENDSNVNLKMIKIIKKMGDTVEESELI 223
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 252
AA A+A+ V++SLGP G+DKM+ GDVT+TNDGATIL
Sbjct: 39 AAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATIL 77
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 71.3 bits (167), Expect = 6e-13
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+ + V HP AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSLSTQPKQPCHLN*LELMQISSRRWL--*MLHRAI 602
+ A EA K I D ++ V+ L +L + L +S WL M A+
Sbjct: 137 QSAAAEAEK-ILDEMSSPVD-LSNDALLNKMATTS----LNSKVVSQHSWLLAPMAVNAV 190
Query: 603 -KTMNPRGNTIYPIQAINILKAPGRSAXGSVLV 698
K +N ++ ++ I I+K G + S L+
Sbjct: 191 KKIINSENDSNVNLKMIKIIKKMGDTVEESELI 223
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 252
AA A+A+ V++SLGP G+DKM+ GDVT+TNDGATIL
Sbjct: 39 AAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATIL 77
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 65.3 bits (152), Expect = 4e-11
Identities = 25/71 (35%), Positives = 51/71 (71%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K LE++HPAA++++ ++Q++++GD T +VVI+AA LL++A L+ + P + +GY
Sbjct: 72 LKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGY 131
Query: 429 RLACKEAVKYI 461
A ++A++ +
Sbjct: 132 EQAAEKALEIL 142
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +1
Query: 136 AAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
A +A+ ++S+ GP G++KM+++ I + VTND ATILK
Sbjct: 34 ACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILK 73
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/69 (33%), Positives = 42/69 (60%)
Frame = +3
Query: 258 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 437
+ ++HP A ++ + + QD+ GDGTTS V++ ELLK A+ LV +HP + G+ A
Sbjct: 67 MAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWA 126
Query: 438 CKEAVKYIQ 464
+ ++ ++
Sbjct: 127 NTKTLELLE 135
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 252
A + ++++S+LGP G KMLV GD+ +T DG +L
Sbjct: 27 ARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/69 (33%), Positives = 42/69 (60%)
Frame = +3
Query: 258 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 437
+ ++HP A ++ + + QD+ GDGTTS V++ ELLK A+ LV +HP + G+ A
Sbjct: 67 MAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWA 126
Query: 438 CKEAVKYIQ 464
+ ++ ++
Sbjct: 127 NTKTLELLE 135
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 252
A + ++++S+LGP G KMLV GD+ +T DG +L
Sbjct: 27 ARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 279 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVK 392
AK++ ++A +EE GDGTT ++A + K E ++
Sbjct: 86 AKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIR 123
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 148 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
+A+ V ++GP G + ++ G +T DG T+ K
Sbjct: 38 LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAK 73
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 279 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 452
AK++ ++A +EE GDGTT ++ + K E ++ + I G A + V
Sbjct: 86 AKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRGNAVEIRRGVMNAVEVVV 143
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 148 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
+A+ V ++GP G + ++ G +T DG T+ K
Sbjct: 38 LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAK 73
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 273 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 452
P A +A +E+GDG V ++A+E+ N E+ KT++ S L KE
Sbjct: 90 PPATGKTAIALAMSQELGDGVPFVPLVASEVFSN--EVKKTEVLMRSFRRAIGLRVKETK 147
Query: 453 KYIQDNLT 476
+ +T
Sbjct: 148 DVYEGEVT 155
>U40800-14|AAA81498.4| 727|Caenorhabditis elegans Hypothetical
protein D2096.11 protein.
Length = 727
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 482 SRVTWQAVSINTAKTTMSSKLIGADADFFSEMVVDAAQGNQNNEPQRKYYIPYPS 646
S + +VS NT + ++ L ADA+F + ++DA + NN P K I Y S
Sbjct: 310 SNINSDSVS-NTERLNIA--LAAADAEFGAGRLLDAEDVDTNNNPDEKSIITYVS 361
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 315 EEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV-KYIQDNLTVTV-E 488
+ G TS + ++ +E+ + T I GY + C++A+ + +L T+ E
Sbjct: 557 QSFGRNLTSTELYDVHAGEDYEEITAAGYNQTGNIMGYTVDCRDAIGGTVYGHLPNTIPE 616
Query: 489 SLGRPSLSTQPKQP 530
+PS ST P P
Sbjct: 617 EPTKPSQSTSPSTP 630
>AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical
protein M116.5 protein.
Length = 1064
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 482 SRVTWQAVSINTAKTTMSSKLIGADADFFSEMVVDAAQGNQNNEPQRKYYIPYPS 646
S + +VS NT + ++ L ADA+F + ++DA + NN P K I Y S
Sbjct: 580 SNINSDSVS-NTERLNIA--LAAADAEFGAGRLLDAEDVDTNNNPDEKSIITYVS 631
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 649 IAWIGYIVFPLGFIVLIALCSIYNHLREEI 560
+ W+ +I+F LG I LI C RE+I
Sbjct: 1463 LMWVVFIIFVLGVIFLIIFCIFMKCCREKI 1492
>Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical
protein C06C3.8 protein.
Length = 513
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 227 SLTMVPQY*NAGSGASCCQSLSGTSTATR 313
S ++P+ N SGAS C SL G + TR
Sbjct: 133 STMIIPEMPNGDSGASNCGSLDGVRSVTR 161
>Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 246 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYV 154
CG V C+I IVN +L++ W G L Y+
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL 99
>Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 246 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYV 154
CG V C+I IVN +L++ W G L Y+
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL 99
>AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical
protein Y6E2A.6 protein.
Length = 357
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 120 FSLGLRRILSLLQTKVQL*STFFIVFLTQNSL 25
F L ILS +QT V + TF IVF T ++
Sbjct: 14 FYLRASHILSCIQTPVNIFGTFIIVFKTPKNM 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,063,139
Number of Sequences: 27780
Number of extensions: 325638
Number of successful extensions: 882
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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