Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30939.Seq
(504 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 108 8e-23
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 82 8e-15
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 79 7e-14
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 75 1e-12
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 69 6e-11
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 67 2e-10
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 66 6e-10
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 64 2e-09
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 64 2e-09
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 64 2e-09
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 62 9e-09
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 62 9e-09
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 60 2e-08
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 58 1e-07
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 56 5e-07
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 54 2e-06
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 52 6e-06
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 50 2e-05
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 41 0.014
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 39 0.074
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 38 0.097
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 37 0.22
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 36 0.69
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 35 0.91
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 35 1.2
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 34 1.6
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 34 1.6
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 34 1.6
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 34 2.1
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 33 2.8
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 33 2.8
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 33 3.7
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 33 3.7
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 33 4.8
UniRef50_Q8ITJ5 Cluster: Pro3 precursor; n=1; Glossina morsitans... 33 4.8
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 33 4.8
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 32 6.4
UniRef50_A5C0G0 Cluster: Putative uncharacterized protein; n=2; ... 32 8.5
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 108 bits (259), Expect = 8e-23
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
VGS+VG+YNGKTFNQVEIK EM G YLGEFS+TYK VKHGRPGIG THSSRFIPLK
Sbjct: 90 VGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +3
Query: 48 RGVDLDQLLDMXNEQLMELMHARARXRFARGLKRKXMALVKXLRRAKKEA 197
RGVDLDQLLDM EQLM+L AR R R RGL+RK +L+K LR+AKKEA
Sbjct: 18 RGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEA 67
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 81.8 bits (193), Expect = 8e-15
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
+GS+VGIYNGK FNQVEI+ EM G YLGEFS+TY V+HGR G +SRFIPLK
Sbjct: 90 IGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGRAG---ATTSRFIPLK 142
Score = 52.4 bits (120), Expect = 6e-06
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +3
Query: 15 RKSVFSGSSLTRGVDLDQLLDMXNEQLMELMHARARXRFARGLKRKXMALVKXLRRAKKE 194
+K VF S RGVDL++LL+M E ++L AR R RFARG+ K +K LR AK
Sbjct: 8 KKRVFKTHSY-RGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLA 66
Query: 195 A 197
A
Sbjct: 67 A 67
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 78.6 bits (185), Expect = 7e-14
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Frame = +1
Query: 214 RDREDSLXXHXHXSXXVGSIVG----IYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHG 381
R D L H S++ +YNG +++ +E++ M G +LGEFS+TYK VKHG
Sbjct: 76 RKTNDKLKTHVRNCIITPSMINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHG 135
Query: 382 RPGIGVTHSSRFIPLK 429
PGIG THSSRFIPL+
Sbjct: 136 NPGIGATHSSRFIPLR 151
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 74.5 bits (175), Expect = 1e-12
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
VG IV +YNG ++ + EIK EM G YLGEF +T K VKH PG+G T SS+F+PLK
Sbjct: 96 VGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 68.9 bits (161), Expect = 6e-11
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
VG +Y G+ F +VE++ EM G YLGEF +T V+HG+ GIG T SS+F+PLK
Sbjct: 85 VGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
Score = 34.7 bits (76), Expect = 1.2
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 33 GSSLTRGVDLDQLLDMXNEQLMELMHARARXRFARGLKRKXMALVKXLRRAKKE 194
G RG DLD+L +M E + EL+ AR R RGL + ++ R + E
Sbjct: 11 GEFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTE 64
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 67.3 bits (157), Expect = 2e-10
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
+G V +YNG+ F VEIK M G L E+S++YK V HG+ GIG T SS+F+PL+
Sbjct: 90 IGMTVSVYNGRQFIPVEIKPPMVGRALREYSMSYKIVSHGKVGIGATRSSKFVPLR 145
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 65.7 bits (153), Expect = 6e-10
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGI----GVTHSSRFIPLK 429
+GS+VG++NGK FN++ IK EM G YL EFS+T K V H RP I S+RFIPL+
Sbjct: 101 IGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTRFIPLR 160
Score = 58.4 bits (135), Expect = 9e-08
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +3
Query: 15 RKSVFSGSSLTRGVDLDQLLDMXNEQLMELMHARARXRFARGLKRKXMALVKXLRRAKKE 194
+K F S RG ++D LL M N L +L +AR R RF RGLK++ + L+K LRRAKKE
Sbjct: 17 KKRTFKKFSF-RGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKE 75
Query: 195 A 197
A
Sbjct: 76 A 76
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
VG +YNGK F + ++ EM G YLGEFS+T K V+HG PG+ T SS F+ +K
Sbjct: 84 VGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSSLFLAMK 139
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
VG V +YNGK + V+IK EM G YLGEFS T K KH PGIG T SS + K
Sbjct: 85 VGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPGIGATRSSAHVSKK 140
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 63.7 bits (148), Expect = 2e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
+G++VG++ G + VEIK EM G L +F+ T KHGRPGIG + SS+F+PLK
Sbjct: 94 IGALVGVHVGNGYLPVEIKPEMVGFVLSDFAPTRVTPKHGRPGIGASSSSKFVPLK 149
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 61.7 bits (143), Expect = 9e-09
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
+G GIYNGK F ++++ E G +LGE + T V+HG PG+G T S F+P+K
Sbjct: 106 IGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGMGATRGSMFVPIK 161
Score = 35.9 bits (79), Expect = 0.52
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 48 RGVDLDQLLDMXNEQLMELMHARARXRFARGLKRKXMALVKXLRRAKKEALRMRSQR 218
+G L++L +M ++ ME++ +R R ARG+ K LV +++A++ R + R
Sbjct: 34 KGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDAR 90
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 61.7 bits (143), Expect = 9e-09
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
+G + ++NGK F VE++ EM G GEF+ T V HG G+G T SS+F+PLK
Sbjct: 81 IGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGATRSSKFVPLK 136
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 60.5 bits (140), Expect = 2e-08
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPG 390
VG IVG+YNGK F VE+K +M G YL EF++TYK HG+ G
Sbjct: 95 VGGIVGVYNGKEFVNVEVKFDMIGKYLAEFAMTYKPTTHGKTG 137
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 58.0 bits (134), Expect = 1e-07
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
VG +G+++G+ F VEI EM G LGE++ T + V H PG+G T SS+ + LK
Sbjct: 118 VGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHTGPGVGATRSSKHVALK 173
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 56.0 bits (129), Expect = 5e-07
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
V +++GIY+G F +V+IK EM G L +F+ + K VKH + G+G T SS LK
Sbjct: 89 VDNVIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSKAGVGATRSSSATSLK 144
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/57 (56%), Positives = 32/57 (56%)
Frame = -2
Query: 431 YLSGMNLELCVTPIPGLPCFTXLYVTENSPR*XPXISXLISTWLKVFPL*MPTIEPT 261
YLSGMNLE P PC T YV SPR P IS LIST L PL PT EPT
Sbjct: 11 YLSGMNLE---PERPARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPT 64
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 52.4 bits (120), Expect = 6e-06
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGRPGIGVTHSSRFIPLK 429
VG + +YNG T+ V I G YLGEF++T K V+HG PG+ T SS I K
Sbjct: 103 VGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 158
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 50.4 bits (115), Expect = 2e-05
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Frame = +3
Query: 48 RGVDLDQLLDMXNEQLMELMHARAR------XRFARGLKRKXMALVKXLRRAKKEA 197
RGVDLDQLLDM +EQ M+L AR R R GL RK +L+K LR+AKK A
Sbjct: 31 RGVDLDQLLDMSSEQRMQLNSARRRRLNPGLWRLNPGLWRKQRSLLKRLRKAKKGA 86
Score = 32.7 bits (71), Expect = 4.8
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEI 315
VGS VG+Y+GKTF QVE+
Sbjct: 109 VGSTVGVYDGKTFKQVEM 126
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 41.1 bits (92), Expect = 0.014
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVK 375
VG+IV +YNGK F ++I EM G GEF+ T K K
Sbjct: 63 VGNIVSVYNGKNFVNLKITDEMVGHKYGEFASTRKIAK 100
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 38.7 bits (86), Expect = 0.074
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGR 384
+G + ++NGK FN+V I EM G LGEFS T H +
Sbjct: 38 IGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 38.3 bits (85), Expect = 0.097
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYK 366
VG I+NGK +N+V I +M G LGEFS T K
Sbjct: 49 VGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 37.1 bits (82), Expect = 0.22
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFS 354
VG ++NGKT+N+V I EM G LGEFS
Sbjct: 24 VGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 35.5 bits (78), Expect = 0.69
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVT 360
VG + ++NGKTF V I +M G LGEF+ T
Sbjct: 170 VGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPT 202
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 35.1 bits (77), Expect = 0.91
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 253 SXXVGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKH 378
S V + ++NGKTF + I EM G LGEF+ T H
Sbjct: 101 SDFVNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPTRTFRSH 142
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 34.7 bits (76), Expect = 1.2
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGR 384
V S V IYNGKT + +I G GEF+ T K KH +
Sbjct: 170 VDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 34.3 bits (75), Expect = 1.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKH 378
+G V IYNG + ++IK +M G GEF+ T K H
Sbjct: 40 IGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 34.3 bits (75), Expect = 1.6
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHGR 384
VG IYNGK F ++I EM G GEF+ T K G+
Sbjct: 37 VGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 34.3 bits (75), Expect = 1.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVT 360
V + +YNGKTF + I ++ G LGEFS T
Sbjct: 45 VSLTISVYNGKTFIPIYITEDLVGHKLGEFSPT 77
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 33.9 bits (74), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKHG 381
VG + ++NGK V + M G LGEF+VT HG
Sbjct: 43 VGITIAVHNGKNHIPVLVNENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 33.5 bits (73), Expect = 2.8
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYK 366
VG + IYNGK +IK EM G LGEF T K
Sbjct: 40 VGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTRK 74
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 33.5 bits (73), Expect = 2.8
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYKXVKH 378
VG ++NGK F V I EM G GEF+ T K H
Sbjct: 85 VGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 33.1 bits (72), Expect = 3.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVT 360
+G I+ ++NG+ V I EM G LGEF+ T
Sbjct: 62 IGEIIAVHNGREHIPVYITEEMVGFKLGEFATT 94
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 33.1 bits (72), Expect = 3.7
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYK 366
VG+ ++NGK++ V+I +M G LGEF+ T K
Sbjct: 64 VGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 32.7 bits (71), Expect = 4.8
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEI-KXEMXGXYLGEFS 354
+G IVG+YNGKT NQV I K + YL S
Sbjct: 41 IGYIVGVYNGKTLNQVGILKPKKICHYLTSLS 72
>UniRef50_Q8ITJ5 Cluster: Pro3 precursor; n=1; Glossina morsitans
morsitans|Rep: Pro3 precursor - Glossina morsitans
morsitans (Savannah tsetse fly)
Length = 321
Score = 32.7 bits (71), Expect = 4.8
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 492 FIVXSCKFXVTLSLEVVLDALLERNEP*AVCNTDTGSTVLY 370
+++ + K + + +E +L L +R +P VCN+D+G +Y
Sbjct: 179 YLIANVKCIIHMEIESLLCLLPQRRDPSGVCNSDSGGPAVY 219
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 32.7 bits (71), Expect = 4.8
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFSVTYK 366
VG I+NGK + +EI +M G LGEF+ T K
Sbjct: 47 VGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 32.3 bits (70), Expect = 6.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 262 VGSIVGIYNGKTFNQVEIKXEMXGXYLGEFS 354
VG ++NGK ++ V I EM G LGEFS
Sbjct: 92 VGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_A5C0G0 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 652
Score = 31.9 bits (69), Expect = 8.5
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 339 PRRVLSYVQACKAR*TRYRCYTQLKVHSAQVERLKQPLG 455
PR VL+ + K+R + + VHSAQVE+LK LG
Sbjct: 320 PRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLG 358
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,874,969
Number of Sequences: 1657284
Number of extensions: 4227593
Number of successful extensions: 6662
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 6561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6660
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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