Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30936.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 3e-27
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 117 8e-27
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 101 4e-22
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 101 6e-22
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 100 1e-21
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 92 5e-19
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 89 4e-18
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 85 7e-17
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 80 2e-15
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 68 6e-12
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 57 2e-08
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 50 1e-06
SB_214| Best HMM Match : Arf (HMM E-Value=0) 50 2e-06
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 42 6e-04
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 40 0.002
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 36 0.032
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 36 0.032
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 35 0.055
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 35 0.073
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 31 1.2
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 30 2.1
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 29 3.6
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 29 3.6
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 29 3.6
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 29 4.8
SB_3287| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 28 6.3
SB_40811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 118 bits (285), Expect = 3e-27
Identities = 62/132 (46%), Positives = 76/132 (57%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 434
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +IYVVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDS 94
Query: 435 ADRXRIGISKDELVHMLRXXXXXXXXXXXXXXKQXMGRMSDSSRGTPGPWGLDAXRDRTF 614
DR R+ SK+EL ML+ KQ + S T GL + RDR +
Sbjct: 95 NDRERVNESKEELNKMLQEDELKDAVVLVMANKQDLPNALSVSEITE-KLGLQSIRDRQW 153
Query: 615 QXFKTSAVRSEG 650
A + G
Sbjct: 154 YIQAACATQGTG 165
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 172 SYFRGLLGAREMRILILGLDGAGKTTILINCK 267
S F L G ++MRIL++GLD AGKTTIL K
Sbjct: 7 SLFTRLFGKKQMRILMVGLDAAGKTTILYKLK 38
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 117 bits (282), Expect = 8e-27
Identities = 59/132 (44%), Positives = 79/132 (59%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 434
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 435 ADRXRIGISKDELVHMLRXXXXXXXXXXXXXXKQXMGRMSDSSRGTPGPWGLDAXRDRTF 614
DR R+G +++EL ML KQ + +++ T GL + R+R +
Sbjct: 95 NDRERVGEAREELNRMLNEDELRDAVLLVFANKQDLPNAMNAAEIT-DKLGLHSLRNRQW 153
Query: 615 QXFKTSAVRSEG 650
T A +G
Sbjct: 154 YIQATCATSGDG 165
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/38 (63%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +1
Query: 157 MGGLFS-YFRGLLGAREMRILILGLDGAGKTTILINCK 267
MGG+F+ F GL G +EMRIL++GLD AGKTTIL K
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLK 38
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 101 bits (243), Expect = 4e-22
Identities = 55/132 (41%), Positives = 72/132 (54%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 434
Y+L++ EVV+T+PT+GFNVE VTYKN+ F VWD+GGQ IR WR YY II+VVDS
Sbjct: 14 YRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDS 73
Query: 435 ADRXRIGISKDELVHMLRXXXXXXXXXXXXXXKQXMGRMSDSSRGTPGPWGLDAXRDRTF 614
ADR R +++EL +L KQ M +S L+ R R +
Sbjct: 74 ADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTASE-IREKLKLNEIRGRPW 132
Query: 615 QXFKTSAVRSEG 650
AV+ EG
Sbjct: 133 FVQSACAVKGEG 144
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 101 bits (242), Expect = 6e-22
Identities = 54/98 (55%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +3
Query: 360 GQTSIRPYWRCYYGNTDAIIYVVDSADRXRIGISKDELVHMLRXXXXXXXXXXXXXXKQX 539
GQTSIRPYWRCYY NTDA+IYVVDS D+ RIGISK EL+ ML KQ
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANKQD 214
Query: 540 M-GRMSDSSRGTPGPWGLDAXRDRTFQXFKTSAVRSEG 650
M G MS S GL A + RT+ FKTSAV+ EG
Sbjct: 215 MEGAMSSSE--VSNALGLSALKSRTWAIFKTSAVKGEG 250
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 100 bits (239), Expect = 1e-21
Identities = 55/132 (41%), Positives = 72/132 (54%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 434
Y L++ E V TIPTIGFNVE V YKN+KF VWD+GGQ IR WR Y+ T +I+VVDS
Sbjct: 108 YHLKLDEPVNTIPTIGFNVEVVEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDS 167
Query: 435 ADRXRIGISKDELVHMLRXXXXXXXXXXXXXXKQXMGRMSDSSRGTPGPWGLDAXRDRTF 614
DR RI +K+EL +L+ KQ + S S+ L R R +
Sbjct: 168 NDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDLPD-SMSTTELSEKLSLHTLRSRNW 226
Query: 615 QXFKTSAVRSEG 650
T A++ +G
Sbjct: 227 YIQATCALKGQG 238
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +1
Query: 151 NKMGG-LFSYFRGLLGAREMRILILGLDGAGKTTILINCK 267
+KMG + S FR LLG E+R+L++GLD AGKTTIL + K
Sbjct: 72 SKMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLK 111
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 91.9 bits (218), Expect = 5e-19
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +3
Query: 195 CKGNADFDTWIGRCRKDDNSYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTS 371
C A + GR RK YKL++ E V T+PT+ FNVE ++ KN+ F VWD+GGQ
Sbjct: 107 CVVPAKYSLRSGRGRKTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDK 166
Query: 372 IRPYWRCYYGNTDAIIYVVDSADRXRIGISKDELVHMLR 488
IR WR Y+ + II+VVDSAD+ RI ++EL +L+
Sbjct: 167 IRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQ 205
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = +3
Query: 231 RCRKDDNSYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTD 410
R R + K + +V+ P GFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT
Sbjct: 478 RSRYKGSRQKTHIQAMVS--PVQGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 535
Query: 411 AIIYVVDSADRXRIGISKDELVHML 485
+I+VVDS DR R G +K+EL ML
Sbjct: 536 GLIFVVDSNDRERAGEAKEELSRML 560
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 84.6 bits (200), Expect = 7e-17
Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
YKL++ E V+TIPTIGFNVE + KN+ +WD+GGQ IRP WR Y+ T+ +++VVD
Sbjct: 37 YKLKLKETVSTIPTIGFNVETLQPTKNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVD 96
Query: 432 SADRXRIGISKDEL 473
S+D R+ +K+EL
Sbjct: 97 SSDVLRMPEAKEEL 110
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +1
Query: 145 LINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTILINCK 267
L++K+ LFS F G R++RI++LGLD AGKTTIL K
Sbjct: 4 LLSKVITLFSEF----GNRQVRIVMLGLDAAGKTTILYKLK 40
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
Y+ + E V T+PT FNVE + +K ++F+VWD+GG+ RP W+ Y TDA+IYVVD
Sbjct: 39 YRNKFREYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVD 98
Query: 432 SADRXRIGISKDELVHML 485
S ++ ++DEL ++L
Sbjct: 99 STSAGKLEEARDELFNLL 116
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 68.1 bits (159), Expect = 6e-12
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +3
Query: 288 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRXRIGISKD 467
IPT+GFN+ +V+ N+ +VWD+GGQ R W Y + I+Y+VD+AD ++ SK+
Sbjct: 50 IPTVGFNMRKVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKN 109
Query: 468 ELVHML 485
EL ++L
Sbjct: 110 ELHNLL 115
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +3
Query: 336 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRXRIGISKDELVHML 485
K +WD+GGQ S+R YWR Y+ +TD +I+VVDSAD+ R+ K EL +L
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLL 52
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +3
Query: 282 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRXRIGIS 461
+T T GFNV +T L +W++GG R YW + +T ++YVVDS+D R S
Sbjct: 196 STTKTEGFNVVCLTTDGLNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNES 255
Query: 462 KDELVHML 485
+D L +L
Sbjct: 256 RDNLKSLL 263
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 202 EMRILILGLDGAGKTTIL 255
E RIL+LGLDG+GK+ L
Sbjct: 166 EKRILVLGLDGSGKSVFL 183
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +3
Query: 258 KLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNT 407
K+++ V + GFNVE V +++LKF +WD+GG +RP WR YY NT
Sbjct: 208 KMEMRAVALGLDGAGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNT 257
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 273 EVVTTIPTIGFNVEQVTYKN-LKFQVWDLGGQTSIRPYWRCYYGNTDAI 416
+V+ PT GFN++ V K + VWD+GGQ IRPYW+ Y+ NTD +
Sbjct: 41 DVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRKIRPYWKNYFENTDIL 89
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +1
Query: 163 GLFSYFRGLLGA--REMRILILGLDGAGKTTIL 255
GL S R L REMRIL+LGLD +GKTTIL
Sbjct: 2 GLLSLLRKLKSEKDREMRILLLGLDNSGKTTIL 34
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3
Query: 351 DLGGQTSIRPYWRCYYGNTDAIIYVVDSADRXRIGISKDELVHML 485
D+GGQ IRP WR Y+ + +I+VVD ADR RI ++ EL ++
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRII 187
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +3
Query: 288 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRXRIGISKD 467
+PT+ E+++ ++F +DLGG R W+ Y+ + I++++D AD R+ SK
Sbjct: 5 VPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKK 64
Query: 468 ELVHML 485
EL +L
Sbjct: 65 ELDSLL 70
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +3
Query: 327 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRXRI 452
KN+ F VWD+GGQ ++R ++ + + +IYVVDS D R+
Sbjct: 16 KNVHFAVWDIGGQPNLRKHY--FTDDKSGLIYVVDSTDIQRL 55
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 273 EVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW 386
E +TT T+G N+ ++T ++K WDLGGQ +R W
Sbjct: 55 EKITT--TVGLNIGKITISHVKLMFWDLGGQQELRTLW 90
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 142 KLINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTILINCK 267
++ + GL+ Y L E ILILGLD AGKTT+L K
Sbjct: 4 EMFTLLSGLWKY---LFQKDEYFILILGLDNAGKTTLLEQIK 42
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 282 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRXRIGIS 461
T + T G Q YK L F+++D+GGQ S R W + + AIIY V + + +
Sbjct: 178 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV-ALSAYDLSLE 236
Query: 462 KDE 470
+DE
Sbjct: 237 EDE 239
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 282 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVV 428
T + T G Q YK L F+++D+GGQ S R W + + AIIY V
Sbjct: 226 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV 274
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 297 IGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 443
+G V + +K Q WD GQ R + YY N DA+I V D +R
Sbjct: 48 VGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNR 96
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 282 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW-RCYYGNTDAIIYVV 428
T + T G T+K+L F+++D+GGQ S R W C+ G T AII+ V
Sbjct: 177 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVT-AIIFCV 225
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 291 PTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 443
PTIG F ++ V + +K Q+WD GQ R + YY N D +I D ++
Sbjct: 38 PTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNK 92
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 282 TTIPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
T I TIG F + +T K +K Q+WD GQ R YY + I+ + D
Sbjct: 36 TYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYD 89
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +3
Query: 270 GEVVTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD--SA 437
G +TTI + F + + + +K Q+WD GQ R YY T +I V D SA
Sbjct: 4 GSYITTIG-VDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSA 62
Query: 438 D 440
D
Sbjct: 63 D 63
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +3
Query: 288 IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 443
I TIG F + + K +K Q+WD GQ R YY II V D D+
Sbjct: 59 ISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 114
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 300 GFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 443
G + V K++K Q+WD GQ R R YY + V D + R
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSR 180
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 291 PTIG--FNVEQVTYKN---LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 443
PT+G F+V + K +K Q+WD GQ R YY NT + + D +R
Sbjct: 44 PTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNR 99
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 333 LKFQVWDLGGQTSIRPYWRC-YYGNTDAIIYVVD 431
+K Q+WD GQ R C YY N +A++++ D
Sbjct: 95 VKLQLWDTAGQERFRKSMVCHYYRNVNAVVFMYD 128
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 327 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
+++K Q+WD GQ R + YY + + +I D
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYD 127
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +3
Query: 297 IGFNVEQVTYKN--LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 443
+ F V+ +T + K +WD GQ R YY +I V D+ R
Sbjct: 43 VDFKVKTLTVEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSR 93
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 315 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
QV K +K QVWD GQ R YY + V D
Sbjct: 55 QVEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYD 93
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 327 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
K +K Q+WD GQ YY I+ V D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYD 37
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 318 VTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
V K KF +WD GQ + YY + A I V D
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYD 41
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +3
Query: 297 IGFNVEQV--TYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
I F V+ V K +K Q+WD GQ R YY I + D
Sbjct: 56 IDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 102
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 333 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRXRIGISK 464
+KF++WD GQ YY A I V D ++ +K
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK 113
>SB_3287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1030
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 526 PTNRXWAGCLTVAEVHQGPGAWTPXAIEPSXSLRLQPSEA-KGLDXGDGLGS 678
PT W+ TV++ H+G W S ++ P EA + GLGS
Sbjct: 594 PTGLIWSNTKTVSDAHKGGAQWCKARGAKSEVWKVAPQEAWVRVATRSGLGS 645
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +3
Query: 291 PTIGFNVEQVTYK-----NLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
PTIG + T + ++ Q+W + GQ R YY DA + + D
Sbjct: 49 PTIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFD 100
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 402 NTDAIIYVVD-SADRXRIGISKDELVHML 485
N DA IYVVD SA+ R+ I EL M+
Sbjct: 126 NVDAFIYVVDSSAESQRVNIGDKELQAMM 154
>SB_40811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 186 IAGCKGNADFDTWIGRCRKDDNSYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLG 359
+A + N D C K Y++Q G V IPT+ + V Y+NL+ DLG
Sbjct: 268 LAAERMNVQKDMLSDYCNKTATKYRIQTGLVPKLIPTLKDKEKYVLHYRNLQLYT-DLG 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,518,476
Number of Sequences: 59808
Number of extensions: 423017
Number of successful extensions: 1161
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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