Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30934.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 107 6e-24
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 79 3e-15
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 59 4e-09
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 55 5e-08
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 52 6e-07
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 50 2e-06
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 49 4e-06
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 47 2e-05
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 42 5e-04
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 35 0.073
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 34 0.096
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.096
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 34 0.13
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 31 1.2
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 29 2.7
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 4.8
SB_6697| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 28 6.3
SB_14152| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07) 28 8.4
SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_8850| Best HMM Match : LIM (HMM E-Value=0.51) 28 8.4
SB_5100| Best HMM Match : Drf_FH1 (HMM E-Value=7.5) 28 8.4
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 107 bits (258), Expect = 6e-24
Identities = 54/132 (40%), Positives = 78/132 (59%)
Frame = +2
Query: 251 RTPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPP 430
++ IKLAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A +I+SWL KKTGPP
Sbjct: 74 KSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNKKTGPP 133
Query: 431 AVEVTSAEQAKELIDANTVIVFGFFSTRAQPEPKLSFQXXXXXXXXXXXXSAMRK*SRSW 610
A ++ +A+ K+ I V V GFF+ + K + + +S
Sbjct: 134 AKDLATADAMKDFI-TKEVAVVGFFTDKESDAAKAFLSAADGIDDVEFGIVSDKLLPQST 192
Query: 611 RLKMKMLCFSRT 646
+L+ LCFSR+
Sbjct: 193 KLRETRLCFSRS 204
Score = 77.8 bits (183), Expect = 8e-15
Identities = 31/61 (50%), Positives = 46/61 (75%)
Frame = +3
Query: 33 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLA 212
M++L +AL+ LA +E+ EE+VLVL++ NF+ + +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 213 P 215
P
Sbjct: 61 P 61
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = +3
Query: 18 ADNIEMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVITTTEY-ILVEFYAP 185
++N++ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 186 WCGHCKSLAP 215
WCGHCK LAP
Sbjct: 413 WCGHCKQLAP 422
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +2
Query: 260 IKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSPIDYSGGRQADDIISWLK---KKTGP 427
I +AK+D+T + E V +PT+K+F + G +DY+GGR DD + +L+ K
Sbjct: 437 IVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGGKAGNE 494
Query: 428 PAVE 439
PA E
Sbjct: 495 PAAE 498
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 PIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPP 430
P+ LAKVD T+ +D YGV GYPTLK FRNG DY G R + II ++KK+ GP
Sbjct: 590 PVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPS 649
Query: 431 AVEVTSAEQ-AKELIDANTVIVFGF 502
+VE+ S + K+L DA + +V GF
Sbjct: 650 SVEIKSVDHLEKKLDDAESNVVVGF 674
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +3
Query: 105 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
+VL L +NF++ + + +LVEF+APWCGHCK LAP
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAP 575
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +3
Query: 108 VLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAP 215
V V+ NF+ ++ T+ +L+EFYAPWCGHCKSL P
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEP 900
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 311 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 424
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAV 436
PI LA VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S+++ + GP +
Sbjct: 228 PIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQVGPSSR 287
Query: 437 EVTSAEQAKELI-DANTVIVFGFF 505
++S + ++ + + + V + GFF
Sbjct: 288 ILSSLKAVQDFMKEKDDVTIMGFF 311
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Frame = +2
Query: 257 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG---- 424
P+ AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+ ++KK++
Sbjct: 113 PVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPNWK 172
Query: 425 -PPAVEVT-SAEQAKELIDANTVIVFGFFS 508
PP +T + E E+++ ++++ FF+
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFA 202
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3
Query: 84 DEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAP
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAP 98
Score = 54.4 bits (125), Expect = 8e-08
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 93 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
P L L+K NF V+ +LVEF+APWCGHCK LAP
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAP 213
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +2
Query: 260 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKKKTGPP 430
I +AK+DAT D+ +Y V G+PT+ F + +PI + GGR+ D+I ++++K
Sbjct: 576 IVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKFVEEK---- 630
Query: 431 AVEVTSAEQAKE 466
A S E+AK+
Sbjct: 631 ATVSLSKEKAKD 642
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 21 DNIEMRVLIFTAIALLGLALGDEVP--TEENVLVLSKANFETVITTTEY-ILVEFYAPWC 191
D++ V F A L + VP +E V V+ F+ ++ + +L+EFYAPWC
Sbjct: 496 DSLREFVEEFKAGNLKPIIKSQPVPKSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWC 555
Query: 192 G 194
G
Sbjct: 556 G 556
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3
Query: 96 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
T+ V+ L+K NF+ V+ ++ LVEFYAPWCGHCK LAP
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAP 59
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Frame = +2
Query: 266 LAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKTG 424
+AKVDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++++KTG
Sbjct: 76 IAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 72 LALGDEVPTEENVLV-LSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAP 171
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 93 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
P VL L+ NF I EY+LV+FYAPWC C+ L+P
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSP 88
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +3
Query: 105 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
+VL L +NF++ + + +LVEF+APWCGHCK LAP
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAP 50
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/40 (52%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +3
Query: 99 EENVLVLSKANFET-VITTTEYILVEFYAPWCGHCKSLAP 215
+E+V+ L+ NFE V+ + + LVEF+APWCGHC+ LAP
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAP 117
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Frame = +2
Query: 260 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQADDIISWLKKKTG 424
+K+ +DAT A Y V+GYPT+K F G S DY GGR A DII + K
Sbjct: 130 VKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAA 189
Query: 425 -----PPAVEVTSAEQAKELIDANTVIVFGF 502
P ++ S E KE + + + V F
Sbjct: 190 DSIEPPEVIQAISNEVLKEGCNEHPICVIAF 220
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 293 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 400
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 87 EVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
E+P+E V LS F++ + +++LV FYAPWCGHCK P
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKP 232
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 84 DEVP---TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
DE P T V+ L F+ + +LV FYAPWCGHCK++ P
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKP 119
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 248 RRTPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTG 424
RR I A VD T+E + + +GV GY F + Y+ GR+A D I ++ + G
Sbjct: 264 RRRLIAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREG 319
Query: 425 PP 430
PP
Sbjct: 320 PP 321
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 257 PIKLAKVDATQEQDLAESYGVRGYPT 334
P LA VDAT+E L + + V GYPT
Sbjct: 134 PGVLAAVDATKEAALGKRFKVEGYPT 159
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +3
Query: 99 EENVLV--LSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
E++ LV L ++F + TE++LV FYAPWCGHCK+ P
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKP 184
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 269 AKVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGP 427
AK+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 202 AKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 69 GLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
G D + V+ L+ + + I + E +LV ++APWCGHC + P
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKP 87
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 266 LAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 409
LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 105 LAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 44.4 bits (100), Expect = 9e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 117 LSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
L+ NF+ +I + +LV+FYAPWC HC+ L P
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLP 57
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 260 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 415
+ +AKVD T + +L +R YPT+K + +G Y+G R A+D+ ++ K
Sbjct: 19 LTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDK 70
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 96 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
+E V +L+K F+ I + V+FYAPWC HC LAP
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAP 126
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 317 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 409
+ GYPTL F++G +YSG R D + ++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 99 EENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
E + L+ +F+ + E +LV+FYAPWC C +L P
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRP 59
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 257 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 412
P+ VD T L Y +R YPT + N P + G A DII +++
Sbjct: 335 PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 114 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 215
V SK F V+ + + +V+FYAPWCG C AP
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAP 471
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 72 LALGDEVPTEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAP 215
+AL + NV L +F + +T+ + V+F+APWC C L P
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLP 322
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 36.7 bits (81), Expect = 0.018
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 123 KANFETVITTTE--YILVEFYAPWCGHCKSLAP 215
+A F +VI T+ ++++FYA WCG C+ + P
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKP 50
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +2
Query: 260 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 439
+ +A V+ +E +LA+ GV+ + F G ++Y G + + + + PP
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYY-GHSCNLTNNVVFQMFDPPVTN 162
Query: 440 VTSAEQAKELIDANTVIVFGFF 505
+ + +Q L DA V G+F
Sbjct: 163 IDNKKQRTLLEDAEGTKVVGYF 184
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 105 NVLVLS-KANFETVITT--TEYILVEFYAPWCGHCKSLAP 215
NV VL + F +T T+ ++ +F A WCG CKS+AP
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAP 47
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 272 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 424
K+D Q+LA GV PT +FF+N +D G + +KK G
Sbjct: 63 KIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIG 113
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.096
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 135 ETVITTTEYILVEFYAPWCGHCKSLAP 215
+ VI + +L+ FY PWCG C + AP
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 105 NVLVLSKANFETVITT---TEYILVEFYAPWCGHCKSLAP 215
NV+V+ +F +V + ++++F A WCG CKS+AP
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAP 48
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 272 KVDATQEQDLAESYGVRGYPTLKFFRNGSPID 367
KVD Q Q AES G+R PT F+ N + ID
Sbjct: 64 KVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 311 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 424
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 30.7 bits (66), Expect = 1.2
Identities = 8/36 (22%), Positives = 21/36 (58%)
Frame = +3
Query: 102 ENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSL 209
+ ++ + N + + ++++ + FYAPW HC+ +
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRI 61
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 547 QLKGKFWLWLSSGRKETKYNNSIGIDKFFSLFSRGDLNSRGASLLLQP 404
+++ F W GRK ++ + G+D S F RGD+ + GA+ + P
Sbjct: 357 EIEEPFQAWFDGGRKRSRIDYYGGMD---STFQRGDILTAGANFRICP 401
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 132 FETVITTTEYILVEFYAPWCGHCKSLAP 215
F+ + E ++F A WCG C+ + P
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGP 31
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 105 NVLVLSKANFETVITTTEYILVEFYA 182
NV++L + NF+ VI + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 317 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 409
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2337
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +1
Query: 208 WHRNT-PRQQQSW--LKKNSYQTSES*RNSRTGSRRELRCTRIPDSQILQEWQSYRLFR 375
WHR T P W L KN T + SR G+R+ L+ + IL ++ LF+
Sbjct: 1471 WHRLTIPSTMNDWPQLSKNVQLTVDDFNASRYGTRQALQQNYLDLQMILDKYNEKVLFK 1529
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 263 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 364
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_6697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = -3
Query: 666 LTRFSSKVLEKHNIFIFSLQLLDHFLIADNSKYLVINNLSS*KESFGSG*ALVEKKPNTI 487
+TR +++F L +L + D + YL+ L F +G L + +P+T
Sbjct: 169 VTRAGKLFFLPYSLFGIPLHVLLFNTMLDRTVYLITGLLRRLHHKFSTGSPLSDWEPST- 227
Query: 486 TVLASISSLACSAEVTSTAGGPVFFF 409
T++A ++ L+ S V +A P+F F
Sbjct: 228 TLIALVAFLSMSILVLLSA--PLFVF 251
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/29 (31%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 129 NFETVITTTEYIL--VEFYAPWCGHCKSL 209
+F+ +++++ +L V F+APW HC +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_14152| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 568 LGHQQLEQLKGKFWLWLSSGRKETKYNNS 482
+GH ++ G WL G+ KYN S
Sbjct: 262 IGHHEIHNTNGWIWLLAMEGKNALKYNAS 290
>SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07)
Length = 272
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 347 RNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFSTRAQPE 526
R+ +P+ +G DDI + L + PP E A E+ A+ +V G + E
Sbjct: 173 RDLTPLPGNGVPTLDDIPAVLIAEDRPPTYSEAVEEDALEMTAADVAVVHGGHTGETDTE 232
Query: 527 P 529
P
Sbjct: 233 P 233
>SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 199 ANLWHRNTPRQQQSWLKKNSYQTSES*RNSRTGSR 303
+N H++TPR ++ W K+ +E ++R SR
Sbjct: 91 SNAKHKDTPRPKEDWYKETQSSLAEELDDTRQRSR 125
>SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -1
Query: 254 FFFSQLCCCLGVFRCQRFAVAAPWSIEFN*NVLRGCNYSFKVSFTQN 114
F F LC G + W+ E + N + GC+Y VS Q+
Sbjct: 147 FEFIDLCSGFGFVVLPTVVICTSWNQESHMNNITGCSYQKPVSTNQS 193
>SB_8850| Best HMM Match : LIM (HMM E-Value=0.51)
Length = 1039
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Frame = -3
Query: 663 TRFSSKVLEKHNIFIFSL----QLLDHFLIADN 577
TRF + L+ + IFIF L ++ +HF+I DN
Sbjct: 77 TRFKCECLQPNFIFIFKLSHPKEVTEHFVIKDN 109
>SB_5100| Best HMM Match : Drf_FH1 (HMM E-Value=7.5)
Length = 192
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -3
Query: 513 LVEKKPNTITVLASISSLACSAEVTSTAGGPVFFFSQLMMSSA*RPPE*SIGLPFLKNLR 334
+V PN + +L I S + T P+F FS++ S + P + PF LR
Sbjct: 44 IVPTTPNPLFLLLRIHCSYSSKSIVPTPPNPLFLFSRIYCSYSSEPIVPTTPNPFFLLLR 103
Query: 333 V 331
+
Sbjct: 104 I 104
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,170,907
Number of Sequences: 59808
Number of extensions: 368852
Number of successful extensions: 995
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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