Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30932.Seq
         (419 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071633-1|AAL49255.1|  602|Drosophila melanogaster RE67794p pro...    33   0.20 
AE014298-1263|AAF46437.1|  602|Drosophila melanogaster CG7246-PA...    33   0.20 
AY051737-1|AAK93161.1| 1009|Drosophila melanogaster LD26426p pro...    30   1.4  
AE014297-4269|AAO41607.1| 1009|Drosophila melanogaster CG1646-PC...    30   1.4  
AE014297-4268|AAF56816.1| 1009|Drosophila melanogaster CG1646-PA...    30   1.4  
AE014297-4267|AAO41608.2| 1026|Drosophila melanogaster CG1646-PD...    30   1.4  
AE014297-4266|AAN14302.2| 1066|Drosophila melanogaster CG1646-PB...    30   1.4  

>AY071633-1|AAL49255.1|  602|Drosophila melanogaster RE67794p
           protein.
          Length = 602

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +2

Query: 68  LQKMYEHNGLKATRELYEDFIRTPPTQIELHKIMINIEKSQ---EKLNLKAIRKCYECAV 238
           L+ +++   ++  R+ Y      PP  + LH+ M+ +E S    ++ +LK  R CY+   
Sbjct: 484 LRYLWQERSVEEARKEYAKLAILPPMSLALHRQMVQLESSAAACDQASLKYWRMCYDFMA 543

Query: 239 HHHG 250
            + G
Sbjct: 544 CYFG 547


>AE014298-1263|AAF46437.1|  602|Drosophila melanogaster CG7246-PA
           protein.
          Length = 602

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +2

Query: 68  LQKMYEHNGLKATRELYEDFIRTPPTQIELHKIMINIEKSQ---EKLNLKAIRKCYECAV 238
           L+ +++   ++  R+ Y      PP  + LH+ M+ +E S    ++ +LK  R CY+   
Sbjct: 484 LRYLWQERSVEEARKEYAKLAILPPMSLALHRQMVQLESSAAACDQASLKYWRMCYDFMA 543

Query: 239 HHHG 250
            + G
Sbjct: 544 CYFG 547


>AY051737-1|AAK93161.1| 1009|Drosophila melanogaster LD26426p
           protein.
          Length = 1009

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 268 WADYINFEIENGNAPNSAVVYRRAVGMLKKDIVDEF 375
           W DY++FEIE G+     V++ R   ++   + DEF
Sbjct: 651 WKDYLDFEIEKGDRERVLVLFERC--LIACALYDEF 684


>AE014297-4269|AAO41607.1| 1009|Drosophila melanogaster CG1646-PC,
           isoform C protein.
          Length = 1009

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 268 WADYINFEIENGNAPNSAVVYRRAVGMLKKDIVDEF 375
           W DY++FEIE G+     V++ R   ++   + DEF
Sbjct: 651 WKDYLDFEIEKGDRERVLVLFERC--LIACALYDEF 684


>AE014297-4268|AAF56816.1| 1009|Drosophila melanogaster CG1646-PA,
           isoform A protein.
          Length = 1009

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 268 WADYINFEIENGNAPNSAVVYRRAVGMLKKDIVDEF 375
           W DY++FEIE G+     V++ R   ++   + DEF
Sbjct: 651 WKDYLDFEIEKGDRERVLVLFERC--LIACALYDEF 684


>AE014297-4267|AAO41608.2| 1026|Drosophila melanogaster CG1646-PD,
           isoform D protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 268 WADYINFEIENGNAPNSAVVYRRAVGMLKKDIVDEF 375
           W DY++FEIE G+     V++ R   ++   + DEF
Sbjct: 668 WKDYLDFEIEKGDRERVLVLFERC--LIACALYDEF 701


>AE014297-4266|AAN14302.2| 1066|Drosophila melanogaster CG1646-PB,
           isoform B protein.
          Length = 1066

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 268 WADYINFEIENGNAPNSAVVYRRAVGMLKKDIVDEF 375
           W DY++FEIE G+     V++ R   ++   + DEF
Sbjct: 708 WKDYLDFEIEKGDRERVLVLFERC--LIACALYDEF 741


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,046,609
Number of Sequences: 53049
Number of extensions: 310318
Number of successful extensions: 1199
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)