Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30928.Seq
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 161 3e-40
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 124 8e-29
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 119 2e-27
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 119 2e-27
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 116 2e-26
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 101 5e-22
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 95 3e-20
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 71 8e-13
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 71 8e-13
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 70 1e-12
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 61 6e-10
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 47 1e-05
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 46 3e-05
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 46 3e-05
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 43 2e-04
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 43 2e-04
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 43 2e-04
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 42 3e-04
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 42 3e-04
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 42 3e-04
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z75537-6|CAA99838.2| 348|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z75527-9|CAA99780.2| 348|Caenorhabditis elegans Hypothetical pr... 41 0.001
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 41 0.001
AY008135-1|AAG32088.1| 348|Caenorhabditis elegans heterotrimeri... 41 0.001
Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical pr... 39 0.003
AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeri... 39 0.003
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 39 0.003
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 39 0.003
AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeri... 39 0.004
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 39 0.004
AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, al... 39 0.004
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 39 0.004
U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alph... 38 0.005
AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeri... 38 0.005
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 38 0.007
M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha... 37 0.012
AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeri... 37 0.012
AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein, a... 37 0.012
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 37 0.016
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 37 0.016
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 37 0.016
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 36 0.028
AF039041-7|ABM01867.1| 335|Caenorhabditis elegans G protein, al... 36 0.028
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 35 0.049
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 35 0.064
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 34 0.085
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 34 0.11
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 34 0.11
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 33 0.26
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 33 0.26
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 33 0.26
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 33 0.26
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 33 0.26
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 33 0.26
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 33 0.26
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 33 0.26
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 31 0.79
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 31 0.79
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 31 0.79
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 31 0.79
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 31 0.79
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 31 1.0
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 31 1.0
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 31 1.0
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 31 1.0
AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeri... 30 1.4
AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, al... 30 1.4
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 30 1.8
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 30 1.8
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 30 1.8
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 30 1.8
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 30 1.8
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 29 2.4
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 29 2.4
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 29 3.2
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 29 4.2
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 29 4.2
U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alph... 28 5.6
U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alph... 28 5.6
AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeri... 28 5.6
AF022967-12|AAB69873.2| 467|Caenorhabditis elegans Hypothetical... 28 5.6
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 161 bits (392), Expect = 3e-40
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
Y+LQVGEVVTTIPTIGFNVEQV YKNLKFQVWDLGGQTSIRPYWRCYY NTDAIIYVVDS
Sbjct: 34 YRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDS 93
Query: 434 ADRDRIGISKDELVHMLREEELANA 508
ADRDR+GIS+ EL ML+E+EL A
Sbjct: 94 ADRDRVGISRQELATMLQEDELQGA 118
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +3
Query: 156 MGGLFSYFRGLLGAREMRILILGLDGAGKTTIL 254
MGG+ SYFRGL GAREMRILILGLDGAGKTTIL
Sbjct: 1 MGGVMSYFRGLFGAREMRILILGLDGAGKTTIL 33
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 511 LVVLANKQDMAGCLT*PRYTQALGLXTPCAIEXSQI-L*DFSRXKAXGLDSGRMDWLSKR 687
L VLANKQD+AGCLT +ALGL A+ I + S K GLD MDWL+ +
Sbjct: 120 LAVLANKQDIAGCLTETEVYKALGLD---ALRNRTIQIFKTSASKGEGLDPA-MDWLANQ 175
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 124 bits (298), Expect = 8e-29
Identities = 54/88 (61%), Positives = 70/88 (79%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAXSL 517
DR+R+G +++EL+ ML E+EL +A L
Sbjct: 95 NDRERVGEAREELMRMLAEDELRDAVLL 122
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/38 (65%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +3
Query: 156 MGGLF-SYFRGLLGAREMRILILGLDGAGKTTILINCK 266
MG +F S F+GL G REMRIL++GLD AGKTTIL K
Sbjct: 1 MGNVFGSLFKGLFGKREMRILMVGLDAAGKTTILYKLK 38
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 119 bits (287), Expect = 2e-27
Identities = 54/88 (61%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAXSL 517
D++RI S++EL ML E+EL +A L
Sbjct: 95 NDKERIEESREELHKMLNEDELRDATLL 122
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 171 SYFRGLLGAREMRILILGLDGAGKTTILINCK 266
S F L G R++RIL++GLD AGKTTIL K
Sbjct: 7 SLFNRLFGKRQVRILMVGLDAAGKTTILYKLK 38
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 119 bits (287), Expect = 2e-27
Identities = 54/88 (61%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAXSL 517
D++RI S++EL ML E+EL +A L
Sbjct: 95 NDKERIEESREELHKMLNEDELRDATLL 122
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 171 SYFRGLLGAREMRILILGLDGAGKTTILINCK 266
S F L G R++RIL++GLD AGKTTIL K
Sbjct: 7 SLFNRLFGKRQVRILMVGLDAAGKTTILYKLK 38
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 116 bits (278), Expect = 2e-26
Identities = 50/88 (56%), Positives = 67/88 (76%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++G+ VTTIPT+GFNVE VTYKN+KF VWD+GGQ IRP WR YY T A+I+V+D+
Sbjct: 31 YKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMDA 90
Query: 434 ADRDRIGISKDELVHMLREEELANAXSL 517
ADRDR+ ++ EL ++ + E+ A L
Sbjct: 91 ADRDRVDEARMELHRIINDREMKEAIIL 118
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 186 LLGAREMRILILGLDGAGKTTILINCK 266
+ G +E+RIL+LGLD AGKTTIL K
Sbjct: 8 IFGKKELRILMLGLDAAGKTTILYKLK 34
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 101 bits (242), Expect = 5e-22
Identities = 46/98 (46%), Positives = 66/98 (67%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++ E V TIPTIGFNVE VT++ + VWD+GGQ IR W+ Y+ NT +++VVDS
Sbjct: 35 YKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAXSLF*PTNRTWPD 547
+D +RI +K+EL +L E ELA++ L + P+
Sbjct: 95 SDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPN 132
Score = 34.7 bits (76), Expect = 0.064
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 156 MGGLFSYFRGLLGAR-EMRILILGLDGAGKTTILINCK 266
MG FS + E R L+LGLDGAGKTTIL K
Sbjct: 1 MGLFFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLK 38
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 95.5 bits (227), Expect = 3e-20
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
Y + V T PTIG NVE+V+Y+NL F +WD+GGQ S+R W YY TD +I V+DS
Sbjct: 35 YNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAXSL 517
+D RI I K++L +ML+ E+LA A L
Sbjct: 95 SDTTRIPIMKEQLHNMLQHEDLARAHIL 122
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 198 REMRILILGLDGAGKTTILIN 260
++ +I+++GLD AGKTTIL N
Sbjct: 16 KKYKIIVVGLDNAGKTTILYN 36
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 496 ISERXLVVLANKQDMAGCLT*PRYTQALGLXT 591
++ ++VLANKQD+ G + + LGL T
Sbjct: 116 LARAHILVLANKQDLPGAMNPAEVSTQLGLQT 147
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/79 (46%), Positives = 57/79 (72%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T PT+GF+++ V +K+ + +WD+GGQ S+R YW+ Y+ +TDA+I+VVDS+DR+R+
Sbjct: 43 TIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQC 102
Query: 461 KDELVHMLREEELANAXSL 517
+EL +L EE LA A L
Sbjct: 103 SEELKKLLGEERLAGASLL 121
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 198 REMRILILGLDGAGKTTIL 254
REMRILILGLD AGKTT++
Sbjct: 15 REMRILILGLDNAGKTTLM 33
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 75.4 bits (177), Expect = 4e-14
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 KLQVGEVVTTIPTIGFNVEQVTYK-NLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
+L +V PT GFNV+ V +++ VWD+GGQ SIRPYW YY N D +I+V+DS
Sbjct: 36 QLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDS 95
Query: 434 ADRDRIGISKDELVHMLREEEL 499
D+ R EL +L EE+L
Sbjct: 96 NDKKRFDEMNIELGELLDEEKL 117
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 198 REMRILILGLDGAGKTTIL 254
RE+RIL+LGLD AGKTTIL
Sbjct: 16 REIRILLLGLDNAGKTTIL 34
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 70.9 bits (166), Expect = 8e-13
Identities = 27/71 (38%), Positives = 49/71 (69%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
IPT+GFN+ ++T N+ ++WD+GGQ R W Y +AI+++VD+AD +++ S++
Sbjct: 50 IPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRN 109
Query: 467 ELVHMLREEEL 499
EL+ +L + +L
Sbjct: 110 ELMQLLDKPQL 120
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 70.9 bits (166), Expect = 8e-13
Identities = 27/71 (38%), Positives = 49/71 (69%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
IPT+GFN+ ++T N+ ++WD+GGQ R W Y +AI+++VD+AD +++ S++
Sbjct: 50 IPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRN 109
Query: 467 ELVHMLREEEL 499
EL+ +L + +L
Sbjct: 110 ELMQLLDKPQL 120
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +2
Query: 257 KLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSA 436
K+Q+ V+ PTIGFN+E + YKN + WD+GG +R W+ YY N AI YV+D
Sbjct: 391 KVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPKLRHLWKHYYSNAQAIFYVIDGY 450
Query: 437 DRDRIGISKDELVHMLRE 490
+R + EL ++ +
Sbjct: 451 AVERFSEAIKELNRVMSD 468
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 201 EMRILILGLDGAGKTTILINCKSVR 275
E R+++LGLDGAGKT+I+ K V+
Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQ 393
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 61.3 bits (142), Expect = 6e-10
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT+G V + +NL F +D+ GQ R W Y+ ++ +I+V+DS+DR R+ + KD
Sbjct: 48 VPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKD 107
Query: 467 ELVHMLREEELAN 505
EL+ ++ +++ +
Sbjct: 108 ELMMVMEHKDVVS 120
Score = 34.3 bits (75), Expect = 0.085
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 162 GLFSYFRGL--LGAREMRILILGLDGAGKTTILINCKS 269
G FS L LG +++ I+++GLD +GKTTIL K+
Sbjct: 2 GFFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKT 39
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 511 LVVLANKQDMAGCLT*PRYTQALGL 585
+V+LANK D+ G +T T ALGL
Sbjct: 125 IVILANKMDIPGAMTASDITVALGL 149
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/88 (29%), Positives = 51/88 (57%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
+ L+ + +PT+ EQ++ + F +DLGG R W+ Y+ DA+++++D
Sbjct: 39 HMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDV 98
Query: 434 ADRDRIGISKDELVHMLREEELANAXSL 517
AD +R+ S+ EL +L++E++A+ L
Sbjct: 99 ADAERMQESRVELESLLQDEQIASVPVL 126
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Frame = +3
Query: 156 MGGLFSYFRGLLGA-----REMRILILGLDGAGKTTILINCKSVR 275
M L+ +F G+L ++ +++ LGLD AGKTT+L K R
Sbjct: 1 MSFLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDR 45
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +2
Query: 293 TIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDEL 472
T+G N V N WDLGGQ S+R W YY + +A+I+VVD+ D I +
Sbjct: 56 TVGLNTGNVELNNTCLHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQF 115
Query: 473 VHMLREEELAN 505
++ E + N
Sbjct: 116 KEVMANEIVQN 126
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 198 REMRILILGLDGAGKTTILINCKS 269
++ ++I+GLD AGKTT L KS
Sbjct: 16 KDYYVVIVGLDNAGKTTFLEQTKS 39
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 236 RKDDNSYKLQVGEVV-TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDA 412
R +++Y + ++V I T G N YK + F++ D+GGQ S R W + N D
Sbjct: 172 RLTEDNYVPSIQDIVHCRISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDNVDM 231
Query: 413 IIYVVDSADRDRIGISKDELVHMLREEEL 499
I+++V +D D++ ++ M + E+
Sbjct: 232 ILFIVSMSDYDQLDPEDNKYNRMKQSYEI 260
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 236 RKDDNSYKLQVGEVV-TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDA 412
R +++Y + ++V I T G N YK + F++ D+GGQ S R W + N D
Sbjct: 172 RLTEDNYVPSIQDIVHCRISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDNVDM 231
Query: 413 IIYVVDSADRDRIGISKDELVHMLREEEL 499
I+++V +D D++ ++ M + E+
Sbjct: 232 ILFIVSMSDYDQLDPEDNKYNRMKQSYEI 260
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T + T G T+KNL F+++D+GGQ S R W + + AII+ V ++ D++ +
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQV-LH 236
Query: 461 KDELVHMLRE 490
+DE + + E
Sbjct: 237 EDETTNRMHE 246
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T + T G T+KNL F+++D+GGQ S R W + + AII+ V ++ D++ +
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQV-LH 236
Query: 461 KDELVHMLRE 490
+DE + + E
Sbjct: 237 EDETTNRMHE 246
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T + T G T+KNL F+++D+GGQ S R W + + AII+ V ++ D++ +
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQL-LH 236
Query: 461 KDELVHMLRE 490
+DE + + E
Sbjct: 237 EDETTNRMHE 246
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/68 (25%), Positives = 40/68 (58%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT G ++ KN F+++D+GGQ + R W + + A++++ ++ D++ + +D
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFITSLSEYDQV-LRED 248
Query: 467 ELVHMLRE 490
V+ ++E
Sbjct: 249 ATVNRMKE 256
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/68 (25%), Positives = 40/68 (58%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT G ++ KN F+++D+GGQ + R W + + A++++ ++ D++ + +D
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFITSLSEYDQV-LRED 248
Query: 467 ELVHMLRE 490
V+ ++E
Sbjct: 249 ATVNRMKE 256
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT G +V N+K + D GGQ S R W ++ DA+++V ++ D+ +++D
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFDEADAVLFVAAISEFDQ-KLAED 240
Query: 467 ELVHMLRE 490
E + + E
Sbjct: 241 EETNRMHE 248
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT G +V N+K + D GGQ S R W ++ DA+++V ++ D+ +++D
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFDEADAVLFVAAISEFDQ-KLAED 240
Query: 467 ELVHMLRE 490
E + + E
Sbjct: 241 EETNRMHE 248
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/70 (31%), Positives = 38/70 (54%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T +PT+G T K F+V+D+GGQ S R W + + A+IYV ++ D++ +
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMIYVASLSEYDQV-LL 236
Query: 461 KDELVHMLRE 490
+D + + E
Sbjct: 237 EDNTTNRMHE 246
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/70 (31%), Positives = 38/70 (54%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T +PT+G T K F+V+D+GGQ S R W + + A+IYV ++ D++ +
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMIYVASLSEYDQV-LL 236
Query: 461 KDELVHMLRE 490
+D + + E
Sbjct: 237 EDNTTNRMHE 246
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/70 (31%), Positives = 38/70 (54%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T +PT+G T K F+V+D+GGQ S R W + + A+IYV ++ D++ +
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMIYVASLSEYDQV-LL 236
Query: 461 KDELVHMLRE 490
+D + + E
Sbjct: 237 EDNTTNRMHE 246
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYV 424
IPT+G + + K KF+++D+GGQ S R W + N +A I++
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFI 226
>Z75537-6|CAA99838.2| 348|Caenorhabditis elegans Hypothetical
protein F18E2.5 protein.
Length = 348
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +2
Query: 275 VVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIG 454
++ +PT G T N FQ++D+GGQ R W Y DAI + + ++ D++
Sbjct: 176 IMAYVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCIAISEYDQV- 234
Query: 455 ISKDELVHML 484
+S+D + + L
Sbjct: 235 MSEDMVTNRL 244
>Z75527-9|CAA99780.2| 348|Caenorhabditis elegans Hypothetical
protein F18E2.5 protein.
Length = 348
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +2
Query: 275 VVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIG 454
++ +PT G T N FQ++D+GGQ R W Y DAI + + ++ D++
Sbjct: 176 IMAYVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCIAISEYDQV- 234
Query: 455 ISKDELVHML 484
+S+D + + L
Sbjct: 235 MSEDMVTNRL 244
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYV 424
IPT+G + + K KF+++D+GGQ S R W + N +A I++
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFI 226
>AY008135-1|AAG32088.1| 348|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 348
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +2
Query: 275 VVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIG 454
++ +PT G T N FQ++D+GGQ R W Y DAI + + ++ D++
Sbjct: 176 IMAYVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCIAISEYDQV- 234
Query: 455 ISKDELVHML 484
+S+D + + L
Sbjct: 235 MSEDMVTNRL 244
>Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical
protein R10H10.5 protein.
Length = 352
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T I T G K L F+V D+GGQ S R W + N +AII++ ++ D+ +
Sbjct: 176 TRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDNVNAIIFISSLSEYDQT-LR 234
Query: 461 KDELVHMLRE 490
+D + ++E
Sbjct: 235 EDNCTNRMQE 244
>AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 352
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T I T G K L F+V D+GGQ S R W + N +AII++ ++ D+ +
Sbjct: 176 TRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDNVNAIIFISSLSEYDQT-LR 234
Query: 461 KDELVHMLRE 490
+D + ++E
Sbjct: 235 EDNCTNRMQE 244
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 293 TIGFNVEQVTY-KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDE 469
T GF+ ++ Y + ++D+GG IR W YY IIYV+D + D E
Sbjct: 55 TNGFSTVKMEYDETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYS-TDETFTESIE 113
Query: 470 LVHML 484
+H L
Sbjct: 114 ALHSL 118
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 293 TIGFNVEQVTY-KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDE 469
T GF+ ++ Y + ++D+GG IR W YY IIYV+D + D E
Sbjct: 55 TNGFSTVKMEYDETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYS-TDETFTESIE 113
Query: 470 LVHML 484
+H L
Sbjct: 114 ALHSL 118
>AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T I T G Q YK+ F V+D+GGQ S R W + + A+I+ V ++ D + +
Sbjct: 177 TRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIHCFEDVTALIFCVALSEYDMV-LV 235
Query: 461 KDELVHMLRE 490
+D + +RE
Sbjct: 236 EDCQTNRMRE 245
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
K +K Q+WD GQ R YY + DA++ V D A+R
Sbjct: 50 KKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANR 88
>AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, alpha
subunit protein 16 protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T I T G Q YK+ F V+D+GGQ S R W + + A+I+ V ++ D + +
Sbjct: 177 TRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIHCFEDVTALIFCVALSEYDMV-LV 235
Query: 461 KDELVHMLRE 490
+D + +RE
Sbjct: 236 EDCQTNRMRE 245
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
K +K Q+WD GQ R YY + DA++ V D A+R
Sbjct: 50 KKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANR 88
>U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alpha
subunit protein 3 protein.
Length = 354
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/72 (27%), Positives = 42/72 (58%)
Frame = +2
Query: 275 VVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIG 454
+++ I T G + K++ F+V+D+GGQ S R W + + +AII++ ++ D++
Sbjct: 176 LLSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFEDVNAIIFIAAISEYDQV- 234
Query: 455 ISKDELVHMLRE 490
+ +DE + + E
Sbjct: 235 LFEDETTNRMIE 246
>AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/72 (27%), Positives = 42/72 (58%)
Frame = +2
Query: 275 VVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIG 454
+++ I T G + K++ F+V+D+GGQ S R W + + +AII++ ++ D++
Sbjct: 176 LLSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFEDVNAIIFIAAISEYDQV- 234
Query: 455 ISKDELVHMLRE 490
+ +DE + + E
Sbjct: 235 LFEDETTNRMIE 246
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +2
Query: 293 TIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
TIG F VT K +K Q+WD GQ S R R YY + V D RD
Sbjct: 38 TIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
>M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 354
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/72 (27%), Positives = 41/72 (56%)
Frame = +2
Query: 275 VVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIG 454
+++ I T G + K++ F+V D+GGQ S R W + + +AII++ ++ D++
Sbjct: 176 LLSRIKTTGIVEVKFQMKSVDFRVLDVGGQRSERKKWIHCFEDVNAIIFIAAISEYDQV- 234
Query: 455 ISKDELVHMLRE 490
+ +DE + + E
Sbjct: 235 LFEDETTNRMIE 246
>AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 359
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/56 (30%), Positives = 36/56 (64%)
Frame = +2
Query: 323 YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 490
YK+L F+++D+GGQ S R W + + A+I+ V ++ D + +++D+ ++ + E
Sbjct: 194 YKDLCFKMFDVGGQRSERKKWIHCFDSVTAVIFCVALSEYD-LRLAEDQTMNRMHE 248
>AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein,
alpha subunit protein 4 protein.
Length = 359
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/56 (30%), Positives = 36/56 (64%)
Frame = +2
Query: 323 YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 490
YK+L F+++D+GGQ S R W + + A+I+ V ++ D + +++D+ ++ + E
Sbjct: 194 YKDLCFKMFDVGGQRSERKKWIHCFDSVTAVIFCVALSEYD-LRLAEDQTMNRMHE 248
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T I +GF +++V KF+V+D+GGQ S R W + + +AII++ ++ + + +
Sbjct: 185 TGIVEVGFEIKKV-----KFRVFDVGGQRSERKKWIHCFEDVNAIIFIAALSEYNEV-LF 238
Query: 461 KDELVHMLRE 490
+DE + + E
Sbjct: 239 EDETTNRMIE 248
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T I +GF +++V KF+V+D+GGQ S R W + + +AII++ ++ + + +
Sbjct: 185 TGIVEVGFEIKKV-----KFRVFDVGGQRSERKKWIHCFEDVNAIIFIAALSEYNEV-LF 238
Query: 461 KDELVHMLRE 490
+DE + + E
Sbjct: 239 EDETTNRMIE 248
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +2
Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 460
T I +GF +++V KF+V+D+GGQ S R W + + +AII++ ++ + + +
Sbjct: 185 TGIVEVGFEIKKV-----KFRVFDVGGQRSERKKWIHCFEDVNAIIFIAALSEYNEV-LF 238
Query: 461 KDELVHMLRE 490
+DE + + E
Sbjct: 239 EDETTNRMIE 248
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 287 IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
I TIG F + + K +K Q+WD GQ R YY II V D D++
Sbjct: 41 ISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQE 97
>AF039041-7|ABM01867.1| 335|Caenorhabditis elegans G protein, alpha
subunit protein 18 protein.
Length = 335
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 293 TIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSAD 439
T G N E VT + KF++ ++ G R W Y+ + + +++V+D ++
Sbjct: 168 TCGLNRENVTCQGYKFELLEMPGHHLWRAKWADYFDDPNLVVFVIDLSE 216
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 35.1 bits (77), Expect = 0.049
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIG 454
K +K Q+WD GGQ R + YY + + I+ D + G
Sbjct: 57 KRVKLQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFG 99
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 34.7 bits (76), Expect = 0.064
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 332 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
+K Q+WD GQ R + YY N+ ++ + D+ +R+
Sbjct: 67 VKLQLWDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRE 104
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.085
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 278 VTTIPTIGFNVE--QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRI 451
+TTI + F + + + +K Q+WD GQ R YY T ++ V D + +
Sbjct: 40 ITTIG-VDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESF 98
Query: 452 G 454
G
Sbjct: 99 G 99
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 299 GFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
G + +V+ + +K Q+WD GQ R R YY + V D R
Sbjct: 49 GTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRR 96
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 296 IGFNVEQVTYKN--LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
+ F ++ V N +K Q+WD GQ R + YY + AI+ V D
Sbjct: 42 VDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQSYYRSAHAIVLVYD 88
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 287 IPTIGFNVE----QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
I TIG + + ++ K +K Q+WD GQ R YY II V D
Sbjct: 38 ISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYD 89
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT G + + F++ D+GGQ S R W + N +I+++V ++ D++ + D
Sbjct: 180 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVECD 239
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 332 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
++ QVWD GQ R Y N DA + V D DR+
Sbjct: 105 VRLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRN 142
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT G + + F++ D+GGQ S R W + N +I+++V ++ D++ + D
Sbjct: 180 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVECD 239
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 287 IPTIGFNVE----QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
I TIG + + ++ K +K Q+WD GQ R YY II V D
Sbjct: 38 ISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYD 89
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT G + + F++ D+GGQ S R W + N +I+++V ++ D++ + D
Sbjct: 128 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVECD 187
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT G + + F++ D+GGQ S R W + N +I+++V ++ D++ + D
Sbjct: 180 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVECD 239
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 287 IPTIGFNVE----QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
I TIG + + ++ K +K Q+WD GQ R YY II V D
Sbjct: 38 ISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYD 89
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 332 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 490
+KF++WD GQ YY A I V D +++ +K+ + + R+
Sbjct: 68 IKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQ 120
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+ T G + ++F ++D+GGQ R W + + AII+V S+ + + + +D
Sbjct: 183 VMTTGIFETKFEVDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFVCASSSYNLV-LWED 241
Query: 467 ELVHMLRE 490
+ LRE
Sbjct: 242 NTQNRLRE 249
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+ T G + ++F ++D+GGQ R W + + AII+V S+ + + + +D
Sbjct: 183 VMTTGIFETKFEVDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFVCASSSYNLV-LWED 241
Query: 467 ELVHMLRE 490
+ LRE
Sbjct: 242 NTQNRLRE 249
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+ T G + ++F ++D+GGQ R W + + AII+V S+ + + + +D
Sbjct: 183 VMTTGIFETKFEVDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFVCASSSYNLV-LWED 241
Query: 467 ELVHMLRE 490
+ LRE
Sbjct: 242 NTQNRLRE 249
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+ T G + ++F ++D+GGQ R W + + AII+V S+ + + + +D
Sbjct: 183 VMTTGIFETKFEVDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFVCASSSYNLV-LWED 241
Query: 467 ELVHMLRE 490
+ LRE
Sbjct: 242 NTQNRLRE 249
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 299 GFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
GF ++ K +K VWD GQ R YY + + V D R+
Sbjct: 44 GFRNLEIDRKKVKLHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRE 92
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 299 GFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
G+ Q+ ++ +VWD GQ + R R YY N + V D
Sbjct: 44 GYKDLQIDKYKVRLRVWDTCGQENFRSIIRAYYRNALGALLVYD 87
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 341 QVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDR 448
Q+WD+ GQ R YY + A I V+DS R+R
Sbjct: 64 QIWDISGQDRYGVMTRVYYKDAHAAIIVLDST-RER 98
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 281 TTIPTIG--FNVEQVTYKN--LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
T I TIG F ++ + K +K Q+WD GQ YY I+ V D
Sbjct: 37 TFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYD 90
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 281 TTIPTIG--FNVEQVTYKN--LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
T I TIG F ++ + K +K Q+WD GQ YY I+ V D
Sbjct: 37 TFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYD 90
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 341 QVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDR 448
Q+WD+ GQ R YY + A I V+DS R+R
Sbjct: 64 QIWDISGQDRYGVMTRVYYKDAHAAIIVLDST-RER 98
>AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYV 424
+PT G + +K ++ D+GGQ S + W + N + ++++
Sbjct: 176 VPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNGVLFI 221
>AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, alpha
subunit protein 11 protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYV 424
+PT G + +K ++ D+GGQ S + W + N + ++++
Sbjct: 176 VPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNGVLFI 221
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
K +K Q+WD GQ R YY I + D + + +D
Sbjct: 69 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 115
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
K +K Q+WD GQ R YY I + D + + +D
Sbjct: 69 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 115
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
K +K Q+WD GQ R YY I + D + + +D
Sbjct: 69 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 115
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
K +K Q+WD GQ R YY I + D + + +D
Sbjct: 83 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 129
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
K +K Q+WD GQ R YY I + D + + +D
Sbjct: 69 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 115
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 332 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 490
+K +WD GQ R YY +I V D R S ++L H ++E
Sbjct: 33 VKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRS----SFEKLNHWMQE 81
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 332 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 490
+K +WD GQ R YY +I V D R S ++L H ++E
Sbjct: 60 VKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRS----SFEKLNHWMQE 108
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 248 NSYKLQVGEVV-TTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 370
+SY+L ++V PT+ F + K L+ ++ D+GGQ S
Sbjct: 193 HSYQLTNDDIVHVRKPTVSFKSYKFRIKQLRVEIHDMGGQKS 234
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSA 436
K +K Q+WD GQ R YY + V D A
Sbjct: 58 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSA 436
K +K Q+WD GQ R YY + V D A
Sbjct: 58 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
>U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform a protein.
Length = 368
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 293 TIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
T+ N Y + + D+GGQ S R W + + +++V+D
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKVVLFVID 227
>U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform b protein.
Length = 408
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 293 TIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
T+ N Y + + D+GGQ S R W + + +++V+D
Sbjct: 222 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKVVLFVID 267
>AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 368
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 293 TIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
T+ N Y + + D+GGQ S R W + + +++V+D
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKVVLFVID 227
>AF022967-12|AAB69873.2| 467|Caenorhabditis elegans Hypothetical
protein C13A2.1 protein.
Length = 467
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 569 VYLGYVRHPAMSCLLAKTTSXRSLILLPLTY 477
+Y + +HP ++C+ A T LLP+TY
Sbjct: 420 LYCKFKQHPKINCMQANVTYSSMRKLLPITY 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,947,839
Number of Sequences: 27780
Number of extensions: 338909
Number of successful extensions: 887
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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