Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30917.Seq
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p pro...   116   2e-26
AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA p...   116   2e-26
AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-P...    54   2e-07

>AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p
           protein.
          Length = 95

 Score =  116 bits (280), Expect = 2e-26
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = +1

Query: 1   GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYT 180
           GPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+   HS+EDF     + Y 
Sbjct: 5   GPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEEY--HSLEDFYAAANRAYN 62

Query: 181 LNAQNCWIAALLYLITLVVSGHQF 252
            NA NCWIAA +Y++TL++S  QF
Sbjct: 63  QNAYNCWIAACIYVLTLLLSAQQF 86


>AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA
           protein.
          Length = 95

 Score =  116 bits (280), Expect = 2e-26
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = +1

Query: 1   GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYT 180
           GPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+   HS+EDF     + Y 
Sbjct: 5   GPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEEY--HSLEDFYAAANRAYN 62

Query: 181 LNAQNCWIAALLYLITLVVSGHQF 252
            NA NCWIAA +Y++TL++S  QF
Sbjct: 63  QNAYNCWIAACIYVLTLLLSAQQF 86


>AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-PA
           protein.
          Length = 107

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 27/74 (36%), Positives = 44/74 (59%)
 Frame = +1

Query: 1   GPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYT 180
           G K  L  L +S WG + L L+G+F+Y++++ LLE LP    + P S E F  + ++ Y 
Sbjct: 4   GRKCCLFCLFMSAWGFLMLNLLGIFFYVQSLMLLESLPLPH-HFP-SQEAFKEQADEAYQ 61

Query: 181 LNAQNCWIAALLYL 222
             +  C++AA+ YL
Sbjct: 62  DVSTRCFVAAVFYL 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,059,015
Number of Sequences: 53049
Number of extensions: 600347
Number of successful extensions: 1277
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)