Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30916.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical p... 58 4e-09
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 33 0.20
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 30 1.1
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 30 1.1
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 30 1.1
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 30 1.1
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 30 1.1
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 30 1.1
Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 28 4.4
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 28 4.4
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 28 5.8
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 28 5.8
Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical pr... 27 7.7
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 27 7.7
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 27 7.7
U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protei... 27 7.7
AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine r... 27 7.7
>Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical
protein JC8.3a protein.
Length = 165
Score = 153 bits (370), Expect = 1e-37
Identities = 68/105 (64%), Positives = 90/105 (85%)
Frame = +3
Query: 252 KDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVI 431
+DWKGLK+T +LT+QNR A+I VVPSAA+LI++ LKEPPRDRKK KN+KHNG+++++ +I
Sbjct: 51 QDWKGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTII 110
Query: 432 GIAKIMRNRSMARYLSGSVKEILGHRQSVGCTVEGRPPHDLIXDI 566
IA+IMR RSMA+ L G+VKEILG QSVGCT++G+ PHD+I I
Sbjct: 111 KIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESI 155
Score = 100 bits (239), Expect = 9e-22
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT+ + + C
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60
>Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical
protein JC8.3c protein.
Length = 50
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +3
Query: 447 MRNRSMARYLSGSVKEILGHRQSVGCTVEGRPPHDLIXDI 566
MR RSMA+ L G+VKEILG QSVGCT++G+ PHD+I I
Sbjct: 1 MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESI 40
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 117 KLRGHFVDYLVQLYTIITLNPNGWVWIPQGYRLNVQR 7
K R +D L +L TI GWVW+ G + NVQR
Sbjct: 305 KCRKQKIDMLNELATIFKKRSFGWVWMEGGAQENVQR 341
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical
protein M01G12.6 protein.
Length = 419
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 200 VLLVCLLKRWVMTLPR--PQGLEGSQDHCAADSS 295
+L++CLLKRW M L PQ + D+ + S
Sbjct: 180 ILMICLLKRWKMNLVEKFPQNITKHMDYTPVNIS 213
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 553 RSCGGLPSTVHPTDCLCPRISFTEPERY 470
+SCG P V P+ C C R ++T+P++Y
Sbjct: 27 QSCGCAPK-VQPS-CSCQRTTYTQPQQY 52
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 553 RSCGGLPSTVHPTDCLCPRISFTEPERY 470
+SCG P V P+ C C R ++T+P++Y
Sbjct: 27 QSCGCAPK-VQPS-CSCQRTTYTQPQQY 52
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 553 RSCGGLPSTVHPTDCLCPRISFTEPERY 470
+SCG P V P+ C C R ++T+P++Y
Sbjct: 27 QSCGCAPR-VQPS-CSCQRTTYTQPQQY 52
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 553 RSCGGLPSTVHPTDCLCPRISFTEPERY 470
+SCG P V P+ C C R ++T+P++Y
Sbjct: 27 QSCGCAPR-VQPS-CSCQRTTYTQPQQY 52
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 553 RSCGGLPSTVHPTDCLCPRISFTEPERY 470
+SCG P + P+ C C R ++T+P++Y
Sbjct: 27 QSCGCAPK-IQPS-CSCQRTTYTQPQQY 52
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 553 RSCGGLPSTVHPTDCLCPRISFTEPERY 470
+SCG P + P+ C C R ++T+P++Y
Sbjct: 27 QSCGCAPK-IQPS-CSCQRTTYTQPQQY 52
>Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical
protein F11A6.1b protein.
Length = 760
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 145 LRCVGGEVGATSSLAPKIGPLGLSPKKVGD------DIAKATRTGRVSRSLCS*QFKTDK 306
+R GG+V + LA K G L P GD D K +R+ R +RSL + Q + ++
Sbjct: 64 VRIAGGKVEEANRLANKYGYTNLGPIIPGDEYYLFRDDRKKSRSSRKTRSLSANQLQHEE 123
>Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical
protein F11A6.1a protein.
Length = 692
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 145 LRCVGGEVGATSSLAPKIGPLGLSPKKVGD------DIAKATRTGRVSRSLCS*QFKTDK 306
+R GG+V + LA K G L P GD D K +R+ R +RSL + Q + ++
Sbjct: 64 VRIAGGKVEEANRLANKYGYTNLGPIIPGDEYYLFRDDRKKSRSSRKTRSLSANQLQHEE 123
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 546 VAACLPQYIQLTVCAQESLLLSQKGTGPLICFS*SSQCRLHLQGRC 409
V AC +V A+ES++ K GP+IC S L + C
Sbjct: 774 VEACASMNCDRSVVAKESIMWLAKRYGPVICAKFISSNVLRIMASC 819
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 546 VAACLPQYIQLTVCAQESLLLSQKGTGPLICFS*SSQCRLHLQGRC 409
V AC +V A+ES++ K GP+IC S L + C
Sbjct: 774 VEACASMNCDRSVVAKESIMWLAKRYGPVICAKFISSNVLRIMASC 819
>U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protein
protein.
Length = 692
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 145 LRCVGGEVGATSSLAPKIGPLGLSPKKVGD------DIAKATRTGRVSRSLCS*QFKTDK 306
+R GG+V + LA K G L P GD D K +R+ R +RSL + Q + ++
Sbjct: 64 VRIAGGKVEEANRLANKYGYTNLGPIIPGDEYYLFRDDRKKSRSSRKTRSLSANQLQHEE 123
>AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine
receptor, class x protein12 protein.
Length = 305
Score = 27.5 bits (58), Expect = 7.7
Identities = 8/31 (25%), Positives = 14/31 (45%)
Frame = -2
Query: 129 FIWVKLRGHFVDYLVQLYTIITLNPNGWVWI 37
F+W GH + Y + + +P W W+
Sbjct: 131 FVWSMAIGHVIPYFWRETCYVAYDPVSWTWV 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,110,105
Number of Sequences: 27780
Number of extensions: 294230
Number of successful extensions: 789
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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