Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30915.Seq
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075573-1|AAR82741.1| 332|Drosophila melanogaster SD03439p pro... 78 1e-14
AE014134-160|AAF51451.1| 454|Drosophila melanogaster CG3862-PA ... 78 1e-14
AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p pro... 29 6.1
AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,... 29 6.1
AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,... 29 6.1
U17330-1|AAC46584.1| 372|Drosophila melanogaster passover-vital... 29 8.0
S78495-1|AAB34769.1| 372|Drosophila melanogaster Shak-B (lethal... 29 8.0
AE014298-3050|AAF50883.1| 372|Drosophila melanogaster CG32508-P... 29 8.0
>AY075573-1|AAR82741.1| 332|Drosophila melanogaster SD03439p
protein.
Length = 332
Score = 78.2 bits (184), Expect = 1e-14
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Frame = +2
Query: 254 HVWGFAETGALGIHLPRXXXXXXXXXXXXXLVWHPMRSSFAERFDITNIACGYGFTVASI 433
+VWGF ETGALG+ +V HP R F+ +IT++A GYGFTV ++
Sbjct: 51 YVWGFQETGALGLQT----NVKKAKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAV 106
Query: 434 KTSEQHKVFGTGINTDSQIGY------HSPREIILWNFCLAMHL-FIYLTRAWSVRLKQW 592
+ +FG+G+NTDSQ+G+ + P + + + A+ L + +R+K
Sbjct: 107 NRDDGETLFGSGLNTDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSM 166
Query: 593 QRGRAHTIILDRQRRCLYIXVPMPYGPCXR 682
GRAH ++L Q ++ YG C R
Sbjct: 167 SAGRAHLVVL-TQNGTIFTLGNNSYGQCGR 195
>AE014134-160|AAF51451.1| 454|Drosophila melanogaster CG3862-PA
protein.
Length = 454
Score = 78.2 bits (184), Expect = 1e-14
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Frame = +2
Query: 254 HVWGFAETGALGIHLPRXXXXXXXXXXXXXLVWHPMRSSFAERFDITNIACGYGFTVASI 433
+VWGF ETGALG+ +V HP R F+ +IT++A GYGFTV ++
Sbjct: 47 YVWGFQETGALGLQT----NVKKAKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAV 102
Query: 434 KTSEQHKVFGTGINTDSQIGY------HSPREIILWNFCLAMHL-FIYLTRAWSVRLKQW 592
+ +FG+G+NTDSQ+G+ + P + + + A+ L + +R+K
Sbjct: 103 NRDDGETLFGSGLNTDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSM 162
Query: 593 QRGRAHTIILDRQRRCLYIXVPMPYGPCXR 682
GRAH ++L Q ++ YG C R
Sbjct: 163 SAGRAHLVVL-TQNGTIFTLGNNSYGQCGR 191
>AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p
protein.
Length = 1058
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 389 ITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIIL 520
IT +ACG T+A + + + +V+ G+ + Q+G S + ++L
Sbjct: 304 ITQVACGNRHTLALVPS--RGRVYAFGLGSSGQLGTRSTKSLML 345
>AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,
isoform B protein.
Length = 1058
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 389 ITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIIL 520
IT +ACG T+A + + + +V+ G+ + Q+G S + ++L
Sbjct: 304 ITQVACGNRHTLALVPS--RGRVYAFGLGSSGQLGTRSTKSLML 345
>AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,
isoform A protein.
Length = 1058
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 389 ITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIIL 520
IT +ACG T+A + + + +V+ G+ + Q+G S + ++L
Sbjct: 304 ITQVACGNRHTLALVPS--RGRVYAFGLGSSGQLGTRSTKSLML 345
>U17330-1|AAC46584.1| 372|Drosophila melanogaster passover-vital
protein protein.
Length = 372
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 527 FCLAMHLFIYLTRAWSVRLKQWQRGRAHTIILD 625
FCL ++ T W K W+ G+ H +I+D
Sbjct: 115 FCLFFQAILFYTPRWL--WKSWEGGKIHALIMD 145
>S78495-1|AAB34769.1| 372|Drosophila melanogaster Shak-B (lethal)
protein protein.
Length = 372
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 527 FCLAMHLFIYLTRAWSVRLKQWQRGRAHTIILD 625
FCL ++ T W K W+ G+ H +I+D
Sbjct: 115 FCLFFQAILFYTPRWL--WKSWEGGKIHALIMD 145
>AE014298-3050|AAF50883.1| 372|Drosophila melanogaster CG32508-PA,
isoform A protein.
Length = 372
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 527 FCLAMHLFIYLTRAWSVRLKQWQRGRAHTIILD 625
FCL ++ T W K W+ G+ H +I+D
Sbjct: 115 FCLFFQAILFYTPRWL--WKSWEGGKIHALIMD 145
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,254,891
Number of Sequences: 53049
Number of extensions: 639519
Number of successful extensions: 1803
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -