Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30900.Seq
(524 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 130 3e-29
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 123 2e-27
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 99 5e-20
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 77 2e-13
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 75 8e-13
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 75 1e-12
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 69 7e-11
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 64 1e-09
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 64 2e-09
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 64 2e-09
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 50 4e-05
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 46 4e-04
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 41 0.020
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 40 0.035
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 40 0.046
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 38 0.11
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 36 0.57
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 35 1.00
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 34 1.7
UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing f... 33 3.0
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 33 5.3
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 33 5.3
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 33 5.3
UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 32 9.3
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 130 bits (313), Expect = 3e-29
Identities = 58/85 (68%), Positives = 72/85 (84%)
Frame = +1
Query: 13 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSM 192
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+L LGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 VXIXXTVKGXGHVAQVYAIRQLFQK 267
V I VKG GHVAQ+YAIRQ K
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISK 90
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/54 (50%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKGIKTS*YHTIRVXXL-XPASFEPQKFXGQVAXPR 413
+ISKAL+A+YQKYVDEASKK IK R + P E +KF G A R
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARAR 140
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 123 bits (297), Expect = 2e-27
Identities = 59/89 (66%), Positives = 71/89 (79%)
Frame = +1
Query: 1 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKE 180
A +E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ + P L+YKL EPIL LGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 181 KFSMVXIXXTVKGXGHVAQVYAIRQLFQK 267
+F+ V I VKG G+VAQ+YAIRQ K
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQAISK 92
Score = 48.8 bits (111), Expect = 8e-05
Identities = 28/54 (51%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKGIKTS*YHTIRVXXL-XPASFEPQKFXGQVAXPR 413
AISKAL+A+YQKYVDE SKK IK + R + P EP+KF G A R
Sbjct: 89 AISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARAR 142
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 99.1 bits (236), Expect = 5e-20
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSMV 195
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LV P +L++K+ EP+L +G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 196 XIXXTVKGXGHVAQVYAIRQLFQK 267
I V G GHV+QVYAIRQ K
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAK 87
Score = 38.7 bits (86), Expect = 0.081
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKGIKTS*YHTIRVXXLXPASF-EPQKFXGQVAXPR 413
AI+K L+A++QKYVDE SK +K + R + + EP+KF G+ A R
Sbjct: 84 AIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSR 137
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 77.4 bits (182), Expect = 2e-13
Identities = 31/56 (55%), Positives = 47/56 (83%)
Frame = +1
Query: 22 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFS 189
+V FG+KKTATAVA+CK G G++R+NG+P+ LV P +L++K+ EP+L +G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 75.4 bits (177), Expect = 8e-13
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 25 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSMVXIX 204
V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI+ LG+ F + +
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 205 XTVKGXGHVAQVYAIRQLFQK 267
V G GHV+Q+YA+RQ +
Sbjct: 85 IKVAGGGHVSQIYAVRQAISR 105
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 74.5 bits (175), Expect = 1e-12
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSMV 195
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E L L KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 196 XIXXTVKGXGHVAQVYAIRQLFQK 267
I VKG GHV Q+YA+ Q K
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISK 101
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 68.9 bits (161), Expect = 7e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +1
Query: 25 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSMVXIX 204
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 205 XTVKGXGHVAQVYAIRQLFQK 267
KG G V+Q+YAIRQ K
Sbjct: 63 IFSKGGGKVSQIYAIRQSISK 83
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 64.5 bits (150), Expect = 1e-09
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSM 192
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I +G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 193 VXIXXTVKGXGHVAQVYAIRQLFQK 267
+ I V G G V+Q YA RQ K
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQAIAK 93
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 64.1 bits (149), Expect = 2e-09
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVXPRLLQYKLQEPILXLGKEKFS 189
P+Q+ QVFG KK A +A +G +++V L++ P QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 190 MVXIXXTVKGXGHVAQVYAI 249
V I V G G VAQ+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 64.1 bits (149), Expect = 2e-09
Identities = 26/79 (32%), Positives = 50/79 (63%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSMV 195
++ +Q G++KTA A A + G G +R+NG+P++++ P + ++ + EP++ G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 196 XIXXTVKGXGHVAQVYAIR 252
I V+G G + Q A R
Sbjct: 61 DIDVKVQGGGFMGQAEAAR 79
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 49.6 bits (113), Expect = 4e-05
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSMVXIXXTVK 216
G++K A A A + G G + +NG PL++ + + K+ EP+L G+ S+V I V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 217 GXGHVAQVYAIR 252
G G + Q A+R
Sbjct: 71 GGGVMGQADAVR 82
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 46.4 bits (105), Expect = 4e-04
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYCKR-GHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSM 192
+++V G+KK A A C + G +R+N P L+ L+ KL+E I + +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 193 VXIXXTVKGXGHVAQVYAIRQLFQK 267
+ T K G V++VYA+R F K
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAK 89
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 7 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 99
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 154 EPILXLGKEKFSMVXIXXTVKGXGHVAQVYAIRQLFQK 267
EP+L +G +KF+ V I V G GH +QVYAIRQ K
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAK 99
Score = 40.7 bits (91), Expect = 0.020
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKGIKTS*YHTIRVXXLXP-ASFEPQKFXGQVAXPR 413
AI+K+L+A+YQKYVDE SK +K + R + EP+KF G+ A R
Sbjct: 96 AIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARAR 149
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 40.7 bits (91), Expect = 0.020
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILXLGKEKFSMVXIXXTV 213
GR+KT+TA + +G G + VNG+PLD R + +++P+ L + I TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 214 KGXGHVAQVYAIR 252
KG G Q AIR
Sbjct: 66 KGGGINGQAGAIR 78
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 39.9 bits (89), Expect = 0.035
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILXLGKEKFSMVXIXXTV 213
GR+KT++A + + G G + +NG PLD R + +++P++ L + S + TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 214 KGXGHVAQVYAIR 252
+G G Q AIR
Sbjct: 71 QGGGDSGQAGAIR 83
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 39.5 bits (88), Expect = 0.046
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVXPRLLQYKLQEPILXLGKEKFSMVXIXXT 210
G++K A A + K G G + VNG+PLD L L+ +++ P++ + +E I
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 211 VKGXGHVAQVYAIRQLFQK 267
V G G AQ AI+ K
Sbjct: 69 VLGGGFAAQADAIKHGISK 87
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 38.3 bits (85), Expect = 0.11
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVXPRLLQYKLQEPILXLGKEKFSMVXIXXTV 213
GR+KT+ A G G + VNG P L+ L L++P++ G EK I TV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 214 KGXGHVAQVYAIR 252
KG G Q A R
Sbjct: 69 KGGGFTGQAGATR 81
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 35.9 bits (79), Expect = 0.57
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 25 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEP-ILXLGKEKFSMVX 198
+ GR+KTA A Y K G G+++VN P + LL K+ +P +L + KF
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFD--- 64
Query: 199 IXXTVKGXGHVAQVYAI 249
V G G +Q AI
Sbjct: 65 FYIKVSGGGINSQAEAI 81
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 35.1 bits (77), Expect = 1.00
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEKFSMVXIXXTVK 216
G++KT++AV + G G + VNG+ L PRL + L + + TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPRLHDRESATWALRC-TSRLDKYNVWATVR 253
Query: 217 GXGHVAQVYAI 249
G G Q A+
Sbjct: 254 GGGVTGQAEAV 264
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 34.3 bits (75), Expect = 1.7
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILXLGKEKFSMVXIXXTV 213
GR+KTA A K G G L +NG+ L D + + ++ P+ E F V + V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAPL--KATETFGKVDVWVRV 138
Query: 214 KGXGHVAQVYAI 249
G G Q AI
Sbjct: 139 TGGGTTGQTGAI 150
>UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing family
M member 1; n=30; Eutheria|Rep: Pleckstrin homology
domain-containing family M member 1 - Homo sapiens
(Human)
Length = 1058
Score = 33.5 bits (73), Expect = 3.0
Identities = 23/56 (41%), Positives = 27/56 (48%)
Frame = -3
Query: 300 RLHISGRRRSELLK*LSDSVNLCYMTTTLXCXXDXNHREFFLAEXKDRFLKFVLQQ 133
R+H+ GRRR E LK L D + LC NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 32.7 bits (71), Expect = 5.3
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLG-KEKFSMVXIXXTV 213
G++K ++AV G G + VNG+ L+ PRL + + + L + + TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 214 KGXGHVAQVYAI 249
+G G Q AI
Sbjct: 159 RGGGVTGQAEAI 170
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 32.7 bits (71), Expect = 5.3
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXP-RLLQYKLQEPILXLGKEKFSMVXIXXTV 213
GR+K A G G + NGR L+ P +L Q ++ P++ LG+E I +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 214 KGXGHVAQVYAIR 252
G G Q A R
Sbjct: 120 GGGGPTGQAGAFR 132
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 32.7 bits (71), Expect = 5.3
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +1
Query: 37 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVXPR-LLQYKLQEPILXLG-KEKFSMVXIXX 207
GR+KT+ A G+G +NG ++ + + L + +QEP+ L K +F+++
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 208 TVKGXGHVAQVYAIR 252
VKG G V QV AI+
Sbjct: 77 KVKGGGLVGQVNAIK 91
>UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 492
Score = 31.9 bits (69), Expect = 9.3
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 40 RKKTATAVAYCKRGHGMLRV-NGRPLDLVXPRLLQYKLQEP 159
R TAT+V +RG G RV +G P V R L Y L++P
Sbjct: 229 RPATATSVGATRRGLGWFRVFSGTPTGAVAARALTYWLRDP 269
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 31.9 bits (69), Expect = 9.3
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQ-YKLQEPILXLGKEK 183
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLG--D 60
Query: 184 FSMVXIXXTVKGXGHVAQVYAIR 252
+ + V G G QV A R
Sbjct: 61 VNSFDLIIRVSGGGVQGQVIATR 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,002,124
Number of Sequences: 1657284
Number of extensions: 7070042
Number of successful extensions: 14839
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14836
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -