Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30900.Seq
         (524 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   140   1e-33
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   140   1e-33
BT003561-1|AAO39565.1|  568|Drosophila melanogaster LP04335p pro...    28   8.9  
AE014297-703|AAF54197.1|  555|Drosophila melanogaster CG18249-PA...    28   8.9  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  140 bits (339), Expect = 1e-33
 Identities = 64/88 (72%), Positives = 75/88 (85%)
 Frame = +1

Query: 4   RREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEK 183
           RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ + P++LQYKLQEP+L LGKEK
Sbjct: 5   RREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEK 64

Query: 184 FSMVXIXXTVKGXGHVAQVYAIRQLFQK 267
           F+ V I   V G GHVAQ+YAIRQ   K
Sbjct: 65  FAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 30/54 (55%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +3

Query: 255 AISKALIAFYQKYVDEASKKGIKTS*YHTIRVXXL-XPASFEPQKFXGQVAXPR 413
           AISKAL+AFYQKYVDEASKK IK       R   +  P   EP+KF G  A  R
Sbjct: 89  AISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARAR 142


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  140 bits (339), Expect = 1e-33
 Identities = 64/88 (72%), Positives = 75/88 (85%)
 Frame = +1

Query: 4   RREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILXLGKEK 183
           RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ + P++LQYKLQEP+L LGKEK
Sbjct: 5   RREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEK 64

Query: 184 FSMVXIXXTVKGXGHVAQVYAIRQLFQK 267
           F+ V I   V G GHVAQ+YAIRQ   K
Sbjct: 65  FAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 30/54 (55%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +3

Query: 255 AISKALIAFYQKYVDEASKKGIKTS*YHTIRVXXL-XPASFEPQKFXGQVAXPR 413
           AISKAL+AFYQKYVDEASKK IK       R   +  P   EP+KF G  A  R
Sbjct: 89  AISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARAR 142


>BT003561-1|AAO39565.1|  568|Drosophila melanogaster LP04335p
           protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -3

Query: 141 LQQSGXNQVQWAPVYTQHSMTTLAIRNCGGGFLTSEYLDGLDGLTS 4
           L+      + W  +     + TL IRNC    ++ E L  ++ LTS
Sbjct: 71  LRNCSRQSITWLVLQLTPGLRTLVIRNCATYHISKESLRPVENLTS 116


>AE014297-703|AAF54197.1|  555|Drosophila melanogaster CG18249-PA
           protein.
          Length = 555

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -3

Query: 141 LQQSGXNQVQWAPVYTQHSMTTLAIRNCGGGFLTSEYLDGLDGLTS 4
           L+      + W  +     + TL IRNC    ++ E L  ++ LTS
Sbjct: 62  LRNCSRQSITWLVLQLTPGLRTLVIRNCATYHISKESLRPVENLTS 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,943,876
Number of Sequences: 53049
Number of extensions: 325126
Number of successful extensions: 690
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)