Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30894.Seq
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 100 4e-20
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 90 3e-17
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 76 6e-13
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 70 3e-11
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 55 1e-06
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 53 5e-06
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 45 0.001
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 45 0.001
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 43 0.004
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 41 0.016
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 40 0.050
UniRef50_Q0CFH9 Cluster: Predicted protein; n=1; Aspergillus ter... 36 0.47
UniRef50_UPI00005A1255 Cluster: PREDICTED: similar to aristaless... 33 3.3
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 33 3.3
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 33 5.8
UniRef50_A5AT78 Cluster: Putative uncharacterized protein; n=1; ... 32 7.6
UniRef50_Q10499 Cluster: Putative flavoprotein C26F1.14C; n=1; S... 32 7.6
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 99.5 bits (237), Expect = 4e-20
Identities = 51/107 (47%), Positives = 67/107 (62%)
Frame = +3
Query: 18 RXPIQAVQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEPXXXXXXXXX 197
+ P+Q+VQVFGRKKTA AVA+CKRG+G+++VNGRPL+++ PR LQYKL EP
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63
Query: 198 XYXXXXXXXXXXXHVAQVYLSXQAISKALIRLLPEICRRSPPKKEIK 338
HVAQ+Y Q+ISKAL+ + + KKEIK
Sbjct: 64 AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEA-SKKEIK 109
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2
Query: 320 SKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
SK+ +DIL+ YDR+LLVADPRRCE KKF GP QKSYR
Sbjct: 104 SKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 90.2 bits (214), Expect = 3e-17
Identities = 51/109 (46%), Positives = 63/109 (57%)
Frame = +3
Query: 12 ARRXPIQAVQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEPXXXXXXX 191
A + IQ+VQV GRKKTA AVAYCKRG+G+L+VNGRPL+ + P L+YKL EP
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 192 XXXYXXXXXXXXXXXHVAQVYLSXQAISKALIRLLPEICRRSPPKKEIK 338
+VAQ+Y QAISKAL+ + KKEIK
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQAISKALVAYYQKYVDEQ-SKKEIK 111
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2
Query: 320 SKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
SK+ +D L+ YDR+LLVADPRRCEPKKF GP QKSYR
Sbjct: 106 SKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 75.8 bits (178), Expect = 6e-13
Identities = 49/146 (33%), Positives = 68/146 (46%)
Frame = +3
Query: 27 IQAVQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEPXXXXXXXXXXYX 206
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 207 XXXXXXXXXXHVAQVYLSXQAISKALIRLLPEICRRSPPKKEIKTS*YHTIGVCWWLTRV 386
HV Q+Y Q ISKAL+ P+ + +EIK + CWW T V
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEA--SEEIKDT---LTRPCWWFTPV 132
Query: 387 AASPRSSVVQCPCQITRNLTGXAFKK 464
A +PR+ P TRN + KK
Sbjct: 133 AMNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 70.1 bits (164), Expect = 3e-11
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +3
Query: 27 IQAVQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEPXXXXXXXXXXYX 206
+ +VQ FG+KK+A AVA+ K G G+++VNG P+ LV P +L++K+ EP
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 207 XXXXXXXXXXHVAQVYLSXQAISKALI 287
HV+QVY QAI+K L+
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAKGLV 90
Score = 41.5 bits (93), Expect = 0.012
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2
Query: 320 SKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
SK + YDR+LL+AD RR EPKKF G QKSYR
Sbjct: 101 SKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 61.7 bits (143), Expect = 1e-08
Identities = 25/46 (54%), Positives = 37/46 (80%)
Frame = +3
Query: 33 AVQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEP 170
+V FG+KKTA AVA+CK G G++R+NG+P+ LV P +L++K+ EP
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEP 50
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2
Query: 335 QDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
+ + V YDR+LL+AD RR EPKKF G QKSYR
Sbjct: 162 RQLFVAYDRTLLIADTRRSEPKKFGGHGARARRQKSYR 199
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/103 (32%), Positives = 47/103 (45%)
Frame = +3
Query: 9 EARRXPIQAVQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEPXXXXXX 188
E R V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EP
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 189 XXXXYXXXXXXXXXXXHVAQVYLSXQAISKALIRLLPEICRRS 317
HV+Q+Y QAIS+ ++ + + RS
Sbjct: 76 SLFKGLDMNIKVAGGGHVSQIYAVRQAISRGVLASVKDEAARS 118
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +2
Query: 344 LVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
LV YDR L+V+DPRRCE KKF G QKSYR
Sbjct: 124 LVSYDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 52.8 bits (121), Expect = 5e-06
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +3
Query: 36 VQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEPXXXXXXXXXXYXXXX 215
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 216 XXXXXXXHVAQVYLSXQAISKALI 287
V+Q+Y Q+ISK L+
Sbjct: 63 IFSKGGGKVSQIYAIRQSISKCLV 86
Score = 33.9 bits (74), Expect = 2.5
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 353 YDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
YD+ LL++D R EPKK+ G QKSYR
Sbjct: 108 YDKKLLISDVSRIEPKKYGGLGARARFQKSYR 139
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 45.2 bits (102), Expect = 0.001
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 27 IQAVQVFGRKKTANAVA-YCKRGHGMLRVNGRPLDLV*PRLLQYKLQEPXXXXXXXXXXY 203
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 204 XXXXXXXXXXXHVAQVYLSXQAISKALI 287
V+Q Y + QAI+K LI
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQAIAKGLI 96
Score = 40.7 bits (91), Expect = 0.022
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2
Query: 323 KEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
K +D + YD+ LL+ADPRRCEPKK+ KSYR
Sbjct: 108 KAALKDKFLAYDKFLLIADPRRCEPKKWGRHSARTRFTKSYR 149
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = +2
Query: 320 SKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
SK + V YDR+LLVAD RR EPKKF G QKSYR
Sbjct: 113 SKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 44.8 bits (101), Expect = 0.001
Identities = 16/48 (33%), Positives = 33/48 (68%)
Frame = +3
Query: 27 IQAVQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEP 170
++ +Q G++KTA A A + G G +R+NG+P++++ P + ++ + EP
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEP 48
Score = 34.7 bits (76), Expect = 1.4
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 347 VPYDRSLLVADPRRCEPKKFXGPV--PVPDNQKSYR 448
+ YDR++LV DPRR EP K P QKSYR
Sbjct: 100 IKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 18 RXPIQAVQVFGRKKTANAVAYCKRGHGMLRV 110
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 41.1 bits (92), Expect = 0.016
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +2
Query: 323 KEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
K+ Q L+ +DR LVAD R+ EPKKF GP QKSYR
Sbjct: 104 KQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 39.5 bits (88), Expect = 0.050
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 311 TKPSKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
TK ++E + + +D+ L+ D RR EPKKF GP QKSYR
Sbjct: 104 TKTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
>UniRef50_Q0CFH9 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 481
Score = 36.3 bits (80), Expect = 0.47
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 71 SCVL-QAWSWNAACXRAAIGLGLTQTAAVQTSGTYPFARQRKNSLWLKSEXQSR-WW 235
SC+ Q+W C R A L L + A++T G Q+ + W++ E R WW
Sbjct: 238 SCLRHQSWILTGVCVRMAFDLNLHRIDAIETEGNCGADEQQLTTRWMRKEGLRRIWW 294
>UniRef50_UPI00005A1255 Cluster: PREDICTED: similar to aristaless 3;
n=1; Canis lupus familiaris|Rep: PREDICTED: similar to
aristaless 3 - Canis familiaris
Length = 446
Score = 33.5 bits (73), Expect = 3.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 379 PASLRAQEVXWSSARAR*PEILPVXPSRKXSGLVS 483
P LRAQ + W +AR+R P L P K G +S
Sbjct: 152 PGPLRAQPIAWDTARSRAPRRLEAGPPTKPPGSIS 186
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 33.5 bits (73), Expect = 3.3
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 353 YDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
+DR++LV DPRR EP+K+ QKSYR
Sbjct: 120 HDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 32.7 bits (71), Expect = 5.8
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 48 GRKKTANAVAYCKRGHGMLRVNGRPLD 128
GR+KT+ A + +G G + VNG+PLD
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLD 34
>UniRef50_A5AT78 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 952
Score = 32.3 bits (70), Expect = 7.6
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +2
Query: 242 STSLPIXPSY--FKGSDSPSTRNM*TKPSKEGNQDILVPYDRSLLVADPRRCEPKKFXGP 415
S+SLP PS+ KGSD + K + ++ P+D + R C P+ P
Sbjct: 178 SSSLPNVPSFSDIKGSDDEMPSELTPKGKVDTEFNVADPFDSEIFEWTQRACSPELCSSP 237
Query: 416 --VPVPDNQKSYRLXLQEXPP 472
+ VPD+ + + E P
Sbjct: 238 MEMQVPDSDEFDEIQKGENKP 258
>UniRef50_Q10499 Cluster: Putative flavoprotein C26F1.14C; n=1;
Schizosaccharomyces pombe|Rep: Putative flavoprotein
C26F1.14C - Schizosaccharomyces pombe (Fission yeast)
Length = 575
Score = 32.3 bits (70), Expect = 7.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 95 WNAACXRAAIGLGLTQTAAVQTSGTYPFARQRKNSLWLKSEXQS 226
W+ AC AA G + T A+ T+P + SLW++ E ++
Sbjct: 83 WHGACFNAATG-DVEDTPAIAALRTFPVTEEGDGSLWIEVEDKN 125
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,357,488
Number of Sequences: 1657284
Number of extensions: 10354994
Number of successful extensions: 23676
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 23162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23661
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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