Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30894.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.11 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    25   0.58 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
 Frame = +2

Query: 191  KNSLWLKSEXQSRWWSCST---SLPIXPSYFKGSDSPSTRNM*TKPSKEGNQDILVPYDR 361
            K S W  S   S WW+ +T   +    P+    +  P+T N  T+ +      +++P   
Sbjct: 1038 KPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPE-- 1095

Query: 362  SLLVADPRR-CEPKKFXGPVPVPDNQKSY 445
               V  P + CEP ++   VP P N  +Y
Sbjct: 1096 ---VDKPSQPCEPGQY---VPDPHNCNAY 1118


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 170 RFLKFVLQQSGLNQVQWPPVXTQHSMTTLAIR 75
           R++K VL +SG++   +    T+H+ T+ A R
Sbjct: 268 RWIKMVLAESGVDTSIYTAHSTRHAATSAAAR 299


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 76  RIASVVMECCVXTGGHWT 129
           R+  V M+C      HWT
Sbjct: 179 RLLGVAMDCLKGNAKHWT 196


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 221 QSRWWSCSTSLPIXPSY 271
           + R+W C   +P  P+Y
Sbjct: 23  KGRFWECLAPIPQPPAY 39


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 221 QSRWWSCSTSLPIXPSY 271
           + R+W C   +P  P+Y
Sbjct: 23  KGRFWECLAPIPQPPAY 39


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 304  YVDEALQRRKSRHPST 351
            Y+DEA QRR ++  ST
Sbjct: 1389 YLDEAFQRRVTQIGST 1404


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 304  YVDEALQRRKSRHPST 351
            Y+DEA QRR ++  ST
Sbjct: 1389 YLDEAFQRRVTQIGST 1404


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 328 FFGGLRLHISGRRRIRAFEIAW 263
           FFG + LH   R+ ++   + W
Sbjct: 42  FFGIMPLHGVSRKNVQEIRLEW 63


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 50  SEYLDGLDGXTSCLLH 3
           S Y+DG+   T C +H
Sbjct: 143 SPYMDGVPFVTQCPIH 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,883
Number of Sequences: 336
Number of extensions: 2575
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)