Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30894.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   112   3e-25
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   112   3e-25
BT015235-1|AAT94464.1| 1688|Drosophila melanogaster RE05635p pro...    30   1.8  
AY058710-1|AAL13939.1| 1043|Drosophila melanogaster LD44304p pro...    30   1.8  
AJ276394-1|CAC01697.1| 1688|Drosophila melanogaster WOC protein ...    30   1.8  
AE014297-4103|AAF56688.2| 1688|Drosophila melanogaster CG5965-PA...    30   1.8  
AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA...    29   4.1  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  112 bits (269), Expect = 3e-25
 Identities = 58/112 (51%), Positives = 72/112 (64%)
 Frame = +3

Query: 3   VQEARRXPIQAVQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEPXXXX 182
           +Q+ RR P+QAVQVFGRKKTA AVAYCKRG+G+L+VNGRPL+ + P++LQYKLQEP    
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 183 XXXXXXYXXXXXXXXXXXHVAQVYLSXQAISKALIRLLPEICRRSPPKKEIK 338
                             HVAQ+Y   QAISKAL+    +    +  KKEIK
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEA-SKKEIK 111



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = +2

Query: 320 SKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
           SK+  +DILV YDR+LLV DPRRCEPKKF GP      QKSYR
Sbjct: 106 SKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  112 bits (269), Expect = 3e-25
 Identities = 58/112 (51%), Positives = 72/112 (64%)
 Frame = +3

Query: 3   VQEARRXPIQAVQVFGRKKTANAVAYCKRGHGMLRVNGRPLDLV*PRLLQYKLQEPXXXX 182
           +Q+ RR P+QAVQVFGRKKTA AVAYCKRG+G+L+VNGRPL+ + P++LQYKLQEP    
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 183 XXXXXXYXXXXXXXXXXXHVAQVYLSXQAISKALIRLLPEICRRSPPKKEIK 338
                             HVAQ+Y   QAISKAL+    +    +  KKEIK
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEA-SKKEIK 111



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = +2

Query: 320 SKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVPDNQKSYR 448
           SK+  +DILV YDR+LLV DPRRCEPKKF GP      QKSYR
Sbjct: 106 SKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>BT015235-1|AAT94464.1| 1688|Drosophila melanogaster RE05635p protein.
          Length = 1688

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 287  SPSTRNM*TKPSKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVP 427
            SP  R+  T+  K+ +  +L+P    + V  P       F  PVP+P
Sbjct: 1131 SPDVRDCATQTEKDYSNKVLIPVPVPIFVPQPMYMYSAPFPVPVPIP 1177


>AY058710-1|AAL13939.1| 1043|Drosophila melanogaster LD44304p
           protein.
          Length = 1043

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 287 SPSTRNM*TKPSKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVP 427
           SP  R+  T+  K+ +  +L+P    + V  P       F  PVP+P
Sbjct: 486 SPDVRDCATQTEKDYSNKVLIPVPVPIFVPQPMYMYSAPFPVPVPIP 532


>AJ276394-1|CAC01697.1| 1688|Drosophila melanogaster WOC protein
            protein.
          Length = 1688

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 287  SPSTRNM*TKPSKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVP 427
            SP  R+  T+  K+ +  +L+P    + V  P       F  PVP+P
Sbjct: 1131 SPDVRDCATQTEKDYSNKVLIPVPVPIFVPQPMYMYSAPFPVPVPIP 1177


>AE014297-4103|AAF56688.2| 1688|Drosophila melanogaster CG5965-PA
            protein.
          Length = 1688

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 287  SPSTRNM*TKPSKEGNQDILVPYDRSLLVADPRRCEPKKFXGPVPVP 427
            SP  R+  T+  K+ +  +L+P    + V  P       F  PVP+P
Sbjct: 1131 SPDVRDCATQTEKDYSNKVLIPVPVPIFVPQPMYMYSAPFPVPVPIP 1177


>AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA
           protein.
          Length = 1307

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 398 KKFXGPVPVPDNQKSYRLXLQEXPPGWYRXRXRVVIAXXLGG 523
           + F   VP+P+     R       P WYR + R  IA  +GG
Sbjct: 261 RPFITGVPIPEQIVPVRPGFVSNRPPWYRNKPRPPIATSVGG 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,580,937
Number of Sequences: 53049
Number of extensions: 489312
Number of successful extensions: 1090
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)